Factsheet for HORVU2Hr1G069110.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G166200.1	Wheat	plastid	82.44	88.99
TraesCS4D01G124000.1	Wheat	plastid	82.15	88.69
TraesCS4A01G189000.1	Wheat	plastid	81.59	88.07
TraesCS6B01G093300.1	Wheat	plastid	81.87	87.84
Zm00001d038694_P001	Maize	cytosol	23.8	77.78
Zm00001d040326_P001	Maize	plastid	49.01	75.88
Os03t0355900-00	Rice	cytosol	3.97	73.68
Zm00001d029200_P001	Maize	plastid	68.56	71.81
Zm00001d047463_P001	Maize	plastid	68.27	71.73
EER92259	Sorghum	plastid	67.71	70.92
Zm00001d046769_P001	Maize	cytosol	38.24	70.68
PGSC0003DMT400058473	Potato	cytosol	49.01	66.8
Bra024000.1-P	Field mustard	plastid	59.49	63.64
CDY68555	Canola	plastid	59.21	63.14
CDY13439	Canola	plastid	58.64	62.35
AT4G31530.2	Thale cress	plastid	59.21	61.83
Zm00001d037076_P001	Maize	cytosol	21.53	61.79
Solyc01g008920.2.1	Tomato	plastid	56.66	61.35
VIT_06s0009g03780.t01	Wine grape	plastid	58.36	61.31
GSMUA_Achr3P17500_001	Banana	plastid	58.07	61.01
KRH07338	Soybean	plastid	55.24	58.56
KRH66235	Soybean	plastid	55.81	55.65
Zm00001d032783_P001	Maize	plastid	43.63	43.87
HORVU7Hr1G083360.1	Barley	mitochondrion, plastid	22.95	28.42
HORVU1Hr1G004430.3	Barley	plastid	22.66	25.24
HORVU5Hr1G074000.3	Barley	mitochondrion	21.25	10.95

Protein Annotations

EnsemblPlants:HORVU2Hr1G069110.2	EnsemblPlantsGene:HORVU2Hr1G069110	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	ncoils:Coil	PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	SEG:seg
SUPFAM:SSF51735	UniParc:UPI000B472DB7	UniProt:A0A287IBH5	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr2H:+:487257682..487264184

Molecular Weight (calculated)

35120.9 Da

IEP (calculated)

9.021

GRAVY (calculated)

-0.220

Length

353 amino acids

Sequence
(BLAST)

001: PAKLPDISPQ VSRAPFPAPP PRSSPTMATA HLSPALAVSS SRHLTXXXXX XXXXXXXXXX XXXXXXXXXX XXRLAASGRG GWRLAAAVEP MTAQQEKAEA
101: SSRLVLVVGG TGGVGQLVVA SLLSREIKTR LLLRNPGKAA SLFGKQDESV LQVYEGDTRN ADDLNPEMFE GVTHVICTTG TTAFPSKRWD GDNTPERVDW
201: DGVRNFVSAM PQTIKRLVLV SSIGVTKYNE IPWSIMNLFG VLKYKKMAED FVRNSGIPFT IIRPGRLTDG PYTSYDLNTL VKATAGERRA VEIGQGDKLV
301: GEASRLVVAE ACIQALDIES TQGKIYEISS VKGEGPGSDQ EKWKQLFAAA ESN

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.