Factsheet for Zm00001d047463_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029200_P001	Maize	plastid	93.15	92.88
Zm00001d038694_P001	Maize	cytosol	26.19	81.48
Zm00001d040326_P001	Maize	plastid	55.06	81.14
Zm00001d046769_P001	Maize	cytosol	44.05	77.49
TraesCS4D01G166200.1	Wheat	plastid	72.02	74.01
TraesCS4D01G124000.1	Wheat	plastid	71.73	73.7
Os03t0355900-00	Rice	cytosol	4.17	73.68
TraesCS6B01G093300.1	Wheat	plastid	71.73	73.25
TraesCS4A01G189000.1	Wheat	plastid	71.13	73.09
PGSC0003DMT400058473	Potato	cytosol	55.36	71.81
HORVU2Hr1G069110.2	Barley	plastid	71.73	68.27
Bra024000.1-P	Field mustard	plastid	66.37	67.58
CDY68555	Canola	plastid	66.37	67.37
GSMUA_Achr3P17500_001	Banana	plastid	66.96	66.96
CDY13439	Canola	plastid	66.07	66.87
Solyc01g008920.2.1	Tomato	plastid	63.99	65.95
Zm00001d037076_P001	Maize	cytosol	24.11	65.85
VIT_06s0009g03780.t01	Wine grape	plastid	65.48	65.48
AT4G31530.2	Thale cress	plastid	63.99	63.61
KRH07338	Soybean	plastid	62.5	63.06
KRH66235	Soybean	plastid	62.5	59.32
Zm00001d032783_P001	Maize	plastid	48.21	46.15
Zm00001d035672_P001	Maize	peroxisome	11.61	31.71
Zm00001d034665_P001	Maize	plastid	23.21	30.35
Zm00001d031799_P001	Maize	plastid	24.4	28.98
Zm00001d011069_P001	Maize	plastid	24.7	27.85
Zm00001d007921_P001	Maize	plastid	19.64	20.95

Protein Annotations

EMBL:BT061687	EnsemblPlants:Zm00001d047463_P001	EnsemblPlants:Zm00001d047463_T001	EnsemblPlantsGene:Zm00001d047463	EntrezGene:100381586	Gene3D:3.40.50.720
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:AQL06572.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000194881D	UniProt:C0HH81	MapMan:35.1	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr9:+:130901839..130905884

Molecular Weight (calculated)

36256.5 Da

IEP (calculated)

8.856

GRAVY (calculated)

-0.190

Length

336 amino acids

Sequence
(BLAST)

001: MAVGCFNPVL SPLVPSPPGR RVRAALRCRW HRHPLTAVSL RRLPCGAAAG RGTRRLAAAA ESQAVQEQPA RAEEAGGAGA AEASSKLVLV VGGTGGVGQL
101: VVASLLSRNI KSRLLLRDPE KASSLFGKQD ESVLQVYKAD TRNPNDLDPQ MFEGVTHVIC CTGTTAFPSK RWDGDNTPER VDWDGIRNLV SALPQTVKRL
201: VLVSSIGVTK YNEIPWSIMN LFGVLKYKKM GEDFVCNSGI PFTIIRAGRL TDGPYTSYDL NTLLKATAGE RRAVVIGKGD KLVGEVSRLV VAEACIQALD
301: IESTEGQIYE INSVKGEGPG TDPEKWEELF RSARSD

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.