Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029200_P001 | Maize | plastid | 84.21 | 4.75 |
| EER92259 | Sorghum | plastid | 84.21 | 4.75 |
| GSMUA_Achr3P17500_001 | Banana | plastid | 78.95 | 4.46 |
| TraesCS4D01G166200.1 | Wheat | plastid | 73.68 | 4.28 |
| TraesCS4A01G189000.1 | Wheat | plastid | 73.68 | 4.28 |
| TraesCS6B01G093300.1 | Wheat | plastid | 73.68 | 4.26 |
| Zm00001d047463_P001 | Maize | plastid | 73.68 | 4.17 |
| TraesCS4D01G124000.1 | Wheat | plastid | 68.42 | 3.98 |
| HORVU2Hr1G069110.2 | Barley | plastid | 73.68 | 3.97 |
| Solyc01g008920.2.1 | Tomato | plastid | 63.16 | 3.68 |
| Bra024000.1-P | Field mustard | plastid | 63.16 | 3.64 |
| CDY68555 | Canola | plastid | 63.16 | 3.63 |
| CDY13439 | Canola | plastid | 63.16 | 3.61 |
| VIT_06s0009g03780.t01 | Wine grape | plastid | 63.16 | 3.57 |
| AT4G31530.2 | Thale cress | plastid | 63.16 | 3.55 |
| KRH07338 | Soybean | plastid | 57.89 | 3.3 |
| KRH66235 | Soybean | plastid | 57.89 | 3.11 |
| Os03t0822200-01 | Rice | extracellular, plasma membrane | 36.84 | 2.72 |
| Zm00001d032783_P001 | Maize | plastid | 36.84 | 1.99 |
| Os05t0110300-01 | Rice | extracellular | 31.58 | 1.91 |
| Os06t0360300-01 | Rice | plastid | 21.05 | 1.37 |
| Zm00001d038694_P001 | Maize | cytosol | 5.26 | 0.93 |
| Zm00001d037076_P001 | Maize | cytosol | 5.26 | 0.81 |
| Zm00001d040326_P001 | Maize | plastid | 5.26 | 0.44 |
| Os10t0100300-01 | Rice | nucleus, plastid | 0.0 | 0.0 |
| PGSC0003DMT400058473 | Potato | cytosol | 0.0 | 0.0 |
| Zm00001d046769_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os03t0355900-00 | EnsemblPlantsGene:Os03g0355900 | ProteinID:BAS84236.1 | UniParc:UPI0003938F03 | UniProt:A0A0P0VXG9 | MapMan:35.2 |
Description
Hypothetical conserved gene. (Os03t0355900-00)
Coordinates
chr3:-:13608897..13609145
Molecular Weight (calculated)
2130.4 Da
IEP (calculated)
4.588
GRAVY (calculated)
-1.226
Length
19 amino acids
Sequence
(BLAST)
(BLAST)
1: GEGPGSDPEK WKELFRAVQ
001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.