Factsheet for Os03t0822200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

cytosol 1
plastid 4
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 18372294
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37247	Sorghum	plastid	92.61	92.61
Zm00001d034665_P001	Maize	plastid	89.88	89.88
TraesCS5D01G495000.1	Wheat	golgi	87.94	88.98
TraesCS5A01G481400.1	Wheat	mitochondrion, plastid	87.55	88.58
TraesCS5B01G494600.1	Wheat	plastid	87.55	77.59
Os05t0110300-01	Rice	extracellular	77.04	63.06
Os03t0355900-00	Rice	cytosol	2.72	36.84
Os06t0360300-01	Rice	plastid	27.24	24.05
Os10t0100300-01	Rice	nucleus, plastid	22.18	11.47

Protein Annotations

EMBL:AK069405	EMBL:AK104151	EMBL:AK104209	EnsemblPlants:Os03t0822200-01	EnsemblPlantsGene:Os03g0822200	EntrezGene:4334608
Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR14194	PANTHER:PTHR14194:SF61	PFAM:PF13460
ProteinID:AAO18441.1	ProteinID:ABF99604.1	ProteinID:BAF13647.1	ProteinID:BAS87109.1	ProteinID:EEE60199.1	RefSeq:XP_015632967.1
SUPFAM:SSF51735	UniParc:UPI0000002782	UniProt:Q852A3	MapMan:35.1	:	:

Description

NAD(P)-binding domain containing protein. (Os03t0822200-01)

Coordinates

chr3:-:34526502..34529096

Molecular Weight (calculated)

27912.1 Da

IEP (calculated)

6.807

GRAVY (calculated)

-0.425

Length

257 amino acids

Sequence
(BLAST)

001: MADSSAARPT VLVTGAGGRT GNIVYNKLKE RSDQFVVRGL VRTEESKQKI GGGNDVYIAD IRDRDHLVPA VQGVDALIIL TSAVPKMKPG FDPSKGGRPE
101: FYYEDGMYPE QVDWIGQKNQ IDTAKAAGVK HIVLVGSMGG TNPNHPLNSL GNGNILVWKR KSEQYLADSG VPYTIIRPGG LQDKDGGVRE LIVGNDDELL
201: QTDTKSIPRA DVAEVCVQAL QYEETKFKAF DLASKPEGTG TPTKDFKSLF SQVTARF

Best Arabidopsis Sequence Match ( AT2G37660.1 )
(BLAST)

001: MAMMTTTTTT FFHPLLPANT YKSGAVASSF VSVPRSSSLQ FRSLVSDSTS ICGPSKFTGK NRRVSVTVSA AATTEPLTVL VTGAGGRTGQ IVYKKLKERS
101: EQFVARGLVR TKESKEKING EDEVFIGDIR DTASIAPAVE GIDALVILTS AVPQMKPGFD PSKGGRPEFF FDDGAYPEQV DWIGQKNQID AAKAAGVKQI
201: VLVGSMGGTN INHPLNSIGN ANILVWKRKA EQYLADSGIP YTIIRAGGLQ DKDGGIRELL VGKDDELLET ETRTIARADV AEVCVQALQL EEAKFKALDL
301: ASKPEGTGTP TKDFKALFTQ VTTKF

Arabidopsis Description

Uncharacterized protein At2g37660, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80934]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.