Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G495000.1 | Wheat | golgi | 87.24 | 99.61 |
| TraesCS5A01G481400.1 | Wheat | mitochondrion, plastid | 85.52 | 97.64 |
| KXG37247 | Sorghum | plastid | 78.28 | 88.33 |
| Os03t0822200-01 | Rice | extracellular, plasma membrane | 77.59 | 87.55 |
| Zm00001d034665_P001 | Maize | plastid | 77.24 | 87.16 |
| TraesCS1B01G037100.1 | Wheat | plastid | 66.55 | 64.33 |
| TraesCS7B01G250100.1 | Wheat | mitochondrion, plastid | 23.79 | 24.21 |
| TraesCS6B01G093300.1 | Wheat | plastid | 27.24 | 24.01 |
| TraesCS5B01G270200.1 | Wheat | plastid | 22.41 | 11.44 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G494600.1 | EnsemblPlantsGene:TraesCS5B01G494600 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR14194 | PANTHER:PTHR14194:SF61 |
| PFAM:PF13460 | SEG:seg | SUPFAM:SSF51735 | TIGR:cd05243 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:662456601..662459174
Molecular Weight (calculated)
31318.5 Da
IEP (calculated)
9.219
GRAVY (calculated)
-0.330
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPRPTVLV TGAGGRTDTL SLLPSPPVSP TKTRRIRLPR RAIPVLTLVE SIAGQIVFSK LRERSDQFAA RGLVRSEESK QKIGGADDVY VADIREAEHL
101: APAVQGADAL VILTSASPKM KPGFDPTKGG RPEFYYEDGA YPEQVDWIGQ KNQIDAAKAA GVKHIVLVGS MGGTNPNHPL NSLGNGNILV WKRKSEQYLA
201: DSGVPYTIIR PGGLQDKDGG VRELIVGKDD ELLQTDTKAI PRADVAEVCV QALQYEEVKF KAFDLASKPE GEGTPTKDFK ALFSKVTARF
101: APAVQGADAL VILTSASPKM KPGFDPTKGG RPEFYYEDGA YPEQVDWIGQ KNQIDAAKAA GVKHIVLVGS MGGTNPNHPL NSLGNGNILV WKRKSEQYLA
201: DSGVPYTIIR PGGLQDKDGG VRELIVGKDD ELLQTDTKAI PRADVAEVCV QALQYEEVKF KAFDLASKPE GEGTPTKDFK ALFSKVTARF
001: MANLPTVLVT GASGRTGQIV YKKLKEGSDK FVAKGLVRSA QGKEKIGGEA DVFIGDITDA DSINPAFQGI DALVILTSAV PKMKPGFDPT KGGRPEFIFE
101: DGQYPEQVDW IGQKNQIDAA KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGVRELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK DFKALFSQVT SRF
101: DGQYPEQVDW IGQKNQIDAA KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK EGGVRELLVG KDDELLQTDT
201: KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK DFKALFSQVT SRF
Arabidopsis Description
Uncharacterized protein At5g02240 [Source:UniProtKB/Swiss-Prot;Acc:Q94EG6]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
SUBAcon: [endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.