Factsheet for Zm00001d038694_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037076_P001	Maize	cytosol	60.19	52.85
Zm00001d040326_P001	Maize	plastid	89.81	42.54
Zm00001d046769_P001	Maize	cytosol	68.52	38.74
PGSC0003DMT400058473	Potato	cytosol	75.93	31.66
Zm00001d029200_P001	Maize	plastid	83.33	26.71
Zm00001d047463_P001	Maize	plastid	81.48	26.19
TraesCS4D01G166200.1	Wheat	plastid	77.78	25.69
TraesCS4D01G124000.1	Wheat	plastid	77.78	25.69
TraesCS4A01G189000.1	Wheat	plastid	77.78	25.69
TraesCS6B01G093300.1	Wheat	plastid	77.78	25.53
Solyc01g008920.2.1	Tomato	plastid	75.93	25.15
Bra024000.1-P	Field mustard	plastid	76.85	25.15
CDY68555	Canola	plastid	76.85	25.08
GSMUA_Achr3P17500_001	Banana	plastid	75.93	24.4
CDY13439	Canola	plastid	75.0	24.4
AT4G31530.2	Thale cress	plastid	75.93	24.26
VIT_06s0009g03780.t01	Wine grape	plastid	74.07	23.81
HORVU2Hr1G069110.2	Barley	plastid	77.78	23.8
KRH07338	Soybean	plastid	71.3	23.12
KRH66235	Soybean	plastid	72.22	22.03
Zm00001d035672_P001	Maize	peroxisome	25.0	21.95
Zm00001d032783_P001	Maize	plastid	59.26	18.23
Zm00001d031799_P001	Maize	plastid	29.63	11.31
Zm00001d034665_P001	Maize	plastid	26.85	11.28
Zm00001d011069_P001	Maize	plastid	25.0	9.06
Zm00001d007921_P001	Maize	plastid	25.93	8.89
Os03t0355900-00	Rice	cytosol	0.93	5.26

Protein Annotations

EnsemblPlants:Zm00001d038694_P001	EnsemblPlants:Zm00001d038694_T001	EnsemblPlantsGene:Zm00001d038694	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR10366	PANTHER:PTHR10366:SF384	PFAM:PF13460	ProteinID:AQK87583.1	SUPFAM:SSF51735	UniParc:UPI0008441DD9
UniProt:A0A1D6M9V8	MapMan:35.2	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr6:-:162651737..162653521

Molecular Weight (calculated)

12008.6 Da

IEP (calculated)

5.082

GRAVY (calculated)

0.129

Length

108 amino acids

Sequence
(BLAST)

001: MNLFGVLKYK KMGEDFVRNS GIPFTIIMPG RLTDGPYTSY DLNTLLKATT GERRAIFASS NTSYLLGDKL VGEVSRLVVA EACIQALDIE STEGQIYEIN
101: SMKVLIFF

Best Arabidopsis Sequence Match ( AT4G31530.1 )
(BLAST)

001: MATTTNLSFA PPSYSRFAAT KSQIRNPLFT SPLPLPSSFF LVRNEASLSS SITPVQAFTE EAVDTSDLAS SSSKLVLVVG GTGGVGQLVV ASLLKRNIRS
101: RLLLRDLDKA TKLFGKQDEY SLQVVKGDTR NAEDLDPSMF EGVTHVICTT GTTAFPSKRW NEENTPEKVD WEGVKNLISA LPSSVKRVVL VSSVGVTKSN
201: ELPWSIMNLF GVLKYKKMGE DFLRDSGLPF TIIRPGRLTD GPYTSYDLNT LLKATAGERR AVVIGQGDNL VGEVSRLVVA EACIQALDIE FTQGKAYEIN
301: SVKGDGPGSD PQQWRELFKA AESK

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSP1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.