Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 4
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G105800.1 | Wheat | plasma membrane, plastid | 98.31 | 98.86 |
| TraesCS6B01G135100.1 | Wheat | plastid | 97.74 | 98.3 |
| HORVU6Hr1G018840.1 | Barley | plastid | 95.67 | 92.7 |
| Os10t0406400-00 | Rice | plasma membrane | 39.92 | 86.53 |
| Zm00001d032994_P002 | Maize | plasma membrane | 81.36 | 84.05 |
| OQU91819 | Sorghum | plasma membrane | 81.73 | 70.23 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 62.9 | 62.43 |
| TraesCS7D01G190000.1 | Wheat | plasma membrane | 61.96 | 60.37 |
| TraesCS7D01G389400.1 | Wheat | plasma membrane | 58.0 | 60.16 |
| TraesCS7D01G389500.1 | Wheat | plasma membrane, plastid | 58.19 | 59.08 |
| TraesCS6D01G158600.1 | Wheat | plasma membrane | 57.06 | 58.49 |
| TraesCS2D01G163000.2 | Wheat | plasma membrane | 58.38 | 53.36 |
| TraesCS3D01G504200.1 | Wheat | plasma membrane | 57.25 | 53.15 |
| TraesCS7D01G389100.1 | Wheat | plasma membrane | 55.37 | 52.97 |
| TraesCS2D01G532800.1 | Wheat | plasma membrane | 52.35 | 52.85 |
| TraesCS3D01G027600.1 | Wheat | plasma membrane | 55.74 | 51.93 |
| TraesCS3D01G015000.1 | Wheat | plasma membrane | 55.18 | 51.58 |
| TraesCS7D01G544700.1 | Wheat | golgi | 50.09 | 51.15 |
| TraesCS3D01G485600.1 | Wheat | plasma membrane | 47.46 | 46.24 |
| TraesCS3D01G302300.1 | Wheat | plasma membrane | 40.11 | 30.26 |
| TraesCS1D01G312700.1 | Wheat | plasma membrane | 39.17 | 30.14 |
| TraesCS1D01G334400.1 | Wheat | plasma membrane | 39.55 | 29.91 |
| TraesCS5D01G415700.1 | Wheat | mitochondrion | 39.55 | 28.53 |
| TraesCS3D01G010500.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.74 | 27.84 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G094300.1 | EnsemblPlantsGene:TraesCS6D01G094300 | Gene3D:3.90.550.10 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 |
| PANTHER:PTHR32044:SF22 | PFAM:PF13641 | SEG:seg | SUPFAM:SSF53448 | TIGR:cd06437 | TMHMM:TMhelix |
| MapMan:21.2.3.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:-:58694151..58698355
Molecular Weight (calculated)
60240.0 Da
IEP (calculated)
7.246
GRAVY (calculated)
0.223
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLGADAAA AAWAAVRARA VAPALTAAVW ACLAMSAMLL LEAACMSLVS LVAVRLLRLR PERRFKWEPM AGALEGGEAD VEDPPASAGR REFPMVLVQI
101: PMYNEKEVYK LSIGAVCALT WPPDRIIIQV LDDSTDPIIK ELVELECQEW ASKKIDIKYE VRNNRKGYKA GALKKGMEHV YAQQCEFVAI FDADFQPESD
201: FLLKTIPFLV HNPKIALVQT RWKFVNYDAC LMTRIQKMSL DYHFKVEQES GSFMHAFFGF NGTAGVWRVS AINESGGWKD RTTVEDMDLA VRACLKEWEF
301: LYVGDIRVKS ELPSTFKAYR HQQHRWTCGA ANLFRKMGWE IVTNKGVSIW KKWHLLYSFL FVRRVIAPIL TFLFYCVVIP LSAMVPEVHI PVWGLVYIPT
401: AITVMNAIRN PGSLHLMPFW ILFENVMSMH RMRAALTGLL ETAHVNDWVV TEKVGDLVKD DFDVPLLEPL KPTECVERIY IPELLLALYL LICASYDYVL
501: GSQTYFMYIY LQALAFIVLG FGFVGMKTPC S
101: PMYNEKEVYK LSIGAVCALT WPPDRIIIQV LDDSTDPIIK ELVELECQEW ASKKIDIKYE VRNNRKGYKA GALKKGMEHV YAQQCEFVAI FDADFQPESD
201: FLLKTIPFLV HNPKIALVQT RWKFVNYDAC LMTRIQKMSL DYHFKVEQES GSFMHAFFGF NGTAGVWRVS AINESGGWKD RTTVEDMDLA VRACLKEWEF
301: LYVGDIRVKS ELPSTFKAYR HQQHRWTCGA ANLFRKMGWE IVTNKGVSIW KKWHLLYSFL FVRRVIAPIL TFLFYCVVIP LSAMVPEVHI PVWGLVYIPT
401: AITVMNAIRN PGSLHLMPFW ILFENVMSMH RMRAALTGLL ETAHVNDWVV TEKVGDLVKD DFDVPLLEPL KPTECVERIY IPELLLALYL LICASYDYVL
501: GSQTYFMYIY LQALAFIVLG FGFVGMKTPC S
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.