Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 4
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G094300.1 | Wheat | plasma membrane, plastid | 98.86 | 98.31 |
| TraesCS6B01G135100.1 | Wheat | plastid | 97.73 | 97.73 |
| HORVU6Hr1G018840.1 | Barley | plastid | 96.78 | 93.25 |
| Os10t0406400-00 | Rice | plasma membrane | 40.15 | 86.53 |
| Zm00001d032994_P002 | Maize | plasma membrane | 81.44 | 83.66 |
| OQU91819 | Sorghum | plasma membrane | 82.01 | 70.06 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, vacuole | 63.07 | 62.24 |
| TraesCS7A01G394100.1 | Wheat | plasma membrane | 59.47 | 60.62 |
| TraesCS7A01G394000.1 | Wheat | plasma membrane | 59.28 | 60.42 |
| TraesCS7A01G189100.2 | Wheat | plasma membrane | 62.69 | 60.07 |
| TraesCS7A01G393800.1 | Wheat | plasma membrane | 57.39 | 58.84 |
| TraesCS6A01G169200.1 | Wheat | plasma membrane | 57.01 | 58.11 |
| TraesCS1A01G010500.1 | Wheat | extracellular, plasma membrane | 44.13 | 54.82 |
| TraesCS2A01G530900.1 | Wheat | golgi | 53.03 | 53.13 |
| TraesCS2A01G157100.3 | Wheat | plasma membrane | 57.77 | 52.59 |
| TraesCS2A01G157200.2 | Wheat | plasma membrane | 57.58 | 52.5 |
| TraesCS3A01G496400.1 | Wheat | plasma membrane | 56.82 | 52.36 |
| TraesCS3A01G019200.1 | Wheat | plasma membrane | 55.3 | 51.77 |
| TraesCS3A01G299500.1 | Wheat | plasma membrane | 40.53 | 30.4 |
| TraesCS1A01G312600.1 | Wheat | mitochondrion, plasma membrane | 39.2 | 30.0 |
| TraesCS1A01G331800.1 | Wheat | plasma membrane | 39.58 | 29.77 |
| TraesCS5A01G405700.1 | Wheat | mitochondrion | 39.58 | 29.73 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G105800.1 | EnsemblPlantsGene:TraesCS6A01G105800 | Gene3D:3.90.550.10 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 |
| PANTHER:PTHR32044:SF22 | PFAM:PF13641 | SEG:seg | SUPFAM:SSF53448 | TIGR:cd06437 | TMHMM:TMhelix |
| MapMan:21.2.3.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:-:73994206..73998394
Molecular Weight (calculated)
60000.8 Da
IEP (calculated)
7.456
GRAVY (calculated)
0.227
Length
528 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPLSAGAAA AAWAAVRARA VAPALTAAVW ACLAMSAMLL LEAACMSLVS LVAVRLLRLR PERRFKWEPM TGALEGGEAD VEDPAGRREF PMVLVQIPMY
101: NEKEVYKLSI GAVCALTWPP DRIIIQVLDD STDPIIKELV ELECQEWASK KIDIKYEVRN NRKGYKAGAL KKGMEHVYAQ QCEFVAIFDA DFQPESDFLL
201: KTIPFLVHNP KIALVQTRWK FVNYDACLMT RIQKMSLDYH FKVEQESGSF MHAFFGFNGT AGVWRVSAIN ESGGWKDRTT VEDMDLAVRA CLKEWEFLYV
301: GDIRVKSELP STFKAYRHQQ HRWTCGAANL FRKMGWEIVT NKGVSIWKKW HLLYSFLFVR RVIAPILTFL FYCVVIPLSA MVPEVHIPVW GLVYIPTAIT
401: IMNAIRNPGS LHLMPFWILF ENVMSMHRMR AALTGLLETA HVNDWVVTEK VGDVVKDDFE VPLLEPLKPT ECVERIYIPE LLLALYLLIC ASYDYVLGSQ
501: TYFMYIYLQA LAFIVLGFGF VGMKTPCS
101: NEKEVYKLSI GAVCALTWPP DRIIIQVLDD STDPIIKELV ELECQEWASK KIDIKYEVRN NRKGYKAGAL KKGMEHVYAQ QCEFVAIFDA DFQPESDFLL
201: KTIPFLVHNP KIALVQTRWK FVNYDACLMT RIQKMSLDYH FKVEQESGSF MHAFFGFNGT AGVWRVSAIN ESGGWKDRTT VEDMDLAVRA CLKEWEFLYV
301: GDIRVKSELP STFKAYRHQQ HRWTCGAANL FRKMGWEIVT NKGVSIWKKW HLLYSFLFVR RVIAPILTFL FYCVVIPLSA MVPEVHIPVW GLVYIPTAIT
401: IMNAIRNPGS LHLMPFWILF ENVMSMHRMR AALTGLLETA HVNDWVVTEK VGDVVKDDFE VPLLEPLKPT ECVERIYIPE LLLALYLLIC ASYDYVLGSQ
501: TYFMYIYLQA LAFIVLGFGF VGMKTPCS
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.