Factsheet for TraesCS5A01G405700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G410400.1	Wheat	mitochondrion	98.01	96.77
TraesCS5D01G415700.1	Wheat	mitochondrion	98.15	93.75
Os03t0770800-01	Rice	plasma membrane	75.96	89.6
EER90820	Sorghum	plasma membrane	86.63	88.01
Zm00001d034205_P001	Maize	plasma membrane	86.49	85.75
Zm00001d013168_P001	Maize	plasma membrane	83.36	85.42
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	70.7	79.9
GSMUA_Achr7P00750_001	Banana	plasma membrane	70.7	79.65
GSMUA_Achr4P32270_001	Banana	plasma membrane	71.83	79.15
GSMUA_Achr5P01920_001	Banana	plasma membrane	72.26	78.88
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	75.68	77.1
GSMUA_Achr6P30200_001	Banana	cytosol	67.57	76.99
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	62.02	76.9
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	75.11	75.0
TraesCS3A01G299500.1	Wheat	plasma membrane	73.97	73.86
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.97	73.39
KRH61452	Soybean	plasma membrane	73.54	73.02
Bra000635.1-P	Field mustard	plasma membrane	71.83	72.98
CDX83148	Canola	plasma membrane	71.83	72.98
KRH15467	Soybean	plasma membrane	72.4	72.82
KRH52142	Soybean	plasma membrane	72.69	72.38
TraesCS1A01G331800.1	Wheat	plasma membrane	72.12	72.22
AT4G07960.1	Thale cress	plasma membrane	70.84	71.24
PGSC0003DMT400030125	Potato	plasma membrane	66.57	70.27
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	68.42	69.91
Solyc04g077470.2.1	Tomato	plasma membrane	70.98	67.25
PGSC0003DMT400012668	Potato	plasma membrane	70.7	66.98
TraesCS7A01G394100.1	Wheat	plasma membrane	32.72	44.4
TraesCS6A01G169200.1	Wheat	plasma membrane	32.43	44.02
TraesCS7A01G394000.1	Wheat	plasma membrane	32.43	44.02
TraesCS7A01G393800.1	Wheat	plasma membrane	32.15	43.88
TraesCS1A01G010500.1	Wheat	extracellular, plasma membrane	25.75	42.59
TraesCS2A01G530900.1	Wheat	golgi	30.16	40.23
TraesCS2A01G157100.3	Wheat	plasma membrane	32.86	39.83
TraesCS6A01G105800.1	Wheat	plasma membrane, plastid	29.73	39.58
TraesCS7A01G189100.2	Wheat	plasma membrane	31.01	39.56
TraesCS2A01G157200.2	Wheat	plasma membrane	32.29	39.21
TraesCS3A01G496400.1	Wheat	plasma membrane	30.01	36.82
TraesCS3A01G019200.1	Wheat	plasma membrane	28.45	35.46

Protein Annotations

EnsemblPlants:TraesCS5A01G405700.1	EnsemblPlantsGene:TraesCS5A01G405700	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044
PANTHER:PTHR32044:SF47	PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chr5A:-:597289477..597292418

Molecular Weight (calculated)

79249.5 Da

IEP (calculated)

8.812

GRAVY (calculated)

0.042

Length

703 amino acids

Sequence
(BLAST)

001: MAPWTGLWGA RAGAGAYRGT PVVVKMENPN WSISEISPED AEDEDFLVSG AARRKGGRGK NAKQITWVLL LKAHRAAGCL ASLASAAVTL GAAARRRVAD
101: GRTDADAGAP GPARESPVLR SRFYAFIRAF LLLSLLLLAV ELAARFHRWD LAASALALPI IGVESLYASW LRLRAAYLAP LLQFLTDACV VLFLIQSADR
201: LIQCLGSFYI TVKRIKPRLR SPALPDAEDP DAGYYPMVLV QIPMCNEKEV YQQSIAAVCN LDWPRSNFLV QVLDDSDDPT TQSLIREEVA KWQQTGARIL
301: YRHRVLRDGY KAGNLKSAMA CSYVKDYEFV AIFDADFQPN PDFLKRTVPH FKDNDELGLV QARWSFVNKD ENLLTRLQNI NLCFHFEVEQ QVNGVFLNFF
401: GFNGTAGVWR IKALEESGGW MERTTVEDMD IAVRAHLHGW KFIFLNDVEC QCELPESYEA YRKQQHRWHS GPMQLFRLCI PDIIKSKISV WKKFNLIFLF
501: FLLRKLILPF YSFTLFCIIL PMTMFVPEAE LPDWVVCYIP ALMSLLNILP SPKSVPFIIP YLLFENTMSV TKFNAMISGL FQLGSAYEWV VTKKSGRSSE
601: GDLISLAAAA PPRELRQQQK TGSAPSLEAL MVLKEEQASP RKEGKKQKKH NRIYKKELAL SLLLLTAAAR SLLTKQGIHF YFLLFQGISF LLVGLDLIGE
701: QVE

Best Arabidopsis Sequence Match ( AT2G24630.1 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.