Factsheet for Os03t0770800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0766900-01	Rice	golgi, plasma membrane	24.33	84.3
EER90820	Sorghum	plasma membrane	93.29	80.35
Zm00001d034205_P001	Maize	plasma membrane	91.95	77.29
TraesCS5A01G405700.1	Wheat	mitochondrion	89.6	75.96
Os09t0428000-00	Rice	cytosol, peroxisome	61.74	75.88
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	71.98	75.66
TraesCS5B01G410400.1	Wheat	mitochondrion	90.1	75.42
Zm00001d013168_P001	Maize	plasma membrane	86.58	75.22
TraesCS5D01G415700.1	Wheat	mitochondrion	89.77	72.69
GSMUA_Achr5P01920_001	Banana	plasma membrane	78.52	72.67
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	58.05	72.23
GSMUA_Achr7P00750_001	Banana	plasma membrane	74.33	70.99
Os07t0124750-00	Rice	plasma membrane	84.73	70.63
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	73.66	70.58
GSMUA_Achr6P30200_001	Banana	cytosol	72.32	69.85
GSMUA_Achr4P32270_001	Banana	plasma membrane	74.5	69.59
Os05t0510800-01	Rice	plasma membrane	78.02	67.59
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	78.69	66.62
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.34	65.09
KRH52142	Soybean	plasma membrane	76.01	64.16
KRH61452	Soybean	plasma membrane	76.17	64.12
KRH15467	Soybean	plasma membrane	75.0	63.95
Bra000635.1-P	Field mustard	plasma membrane	73.99	63.73
CDX83148	Canola	plasma membrane	73.83	63.58
PGSC0003DMT400030125	Potato	plasma membrane	70.47	63.06
AT4G07960.1	Thale cress	plasma membrane	73.49	62.66
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	71.81	62.21
Solyc04g077470.2.1	Tomato	plasma membrane	73.83	59.3
PGSC0003DMT400012668	Potato	plasma membrane	73.49	59.03
Os08t0434632-01	Rice	cytosol	7.21	56.58
Os09t0439100-01	Rice	cytosol	6.71	43.96
Os02t0192500-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	37.92	43.38
Os02t0744650-00	Rice	cytosol, mitochondrion, peroxisome, plasma membrane	28.19	41.9
Os06t0625700-01	Rice	plasma membrane	36.07	40.8
Os03t0169500-01	Rice	plasma membrane	35.74	38.8
Os03t0377700-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	35.23	36.59
Os10t0406400-00	Rice	plasma membrane	14.93	36.33
Os07t0630900-02	Rice	plasma membrane	34.9	35.56
Os09t0572500-01	Rice	golgi, mitochondrion, plasma membrane, plastid	27.68	30.5
Os06t0230100-00	Rice	nucleus	30.7	29.61
Os02t0744600-01	Rice	endoplasmic reticulum, extracellular	1.17	29.17

Protein Annotations

MapMan:21.2.1.1.1	Gene3D:3.90.550.10	ProteinID:AAT85054.1	ProteinID:BAS86591.1	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016740
GO:GO:0016757	GO:GO:0071555	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os03g0770800	EnsemblPlants:Os03t0770800-01
PFAM:PF13641	PANTHER:PTHR32044	PANTHER:PTHR32044:SF47	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00004014DB
SEG:seg	:	:	:	:	:

Description

CELLULOSE SYNTHASE LIKE C9CSLC9. (Os03t0770800-01)

Coordinates

chr3:-:31930835..31934477

Molecular Weight (calculated)

68163.2 Da

IEP (calculated)

7.809

GRAVY (calculated)

0.113

Length

596 amino acids

Sequence
(BLAST)

001: MAPWSGLWGG KLAAAGESPV LRSRFYAFIR AFVVLSVLLL IVELGAYING WDDLAASALA LPVIGVESLY ASWLRFRATY VAPFIQFLTD ACVVLFLIQS
101: ADRLIQCLGC FYIHLKRIKP NPKSPALPDA EDPDAAYYPM VLVQIPMCNE KEVYQQSIAA VCNLDWPRSN FLVQVLDDSD DPTTQTLIRE EVLKWQQNGA
201: RIVYRHRVLR DGYKAGNLKS AMSCSYVKDY EFVAIFDADF QPNPDFLKRT VPHFKDNDEL GLVQARWSFV NKDENLLTRL QNINLCFHFE VEQQVNGIFL
301: NFFGFNGTAG VWRIKALDDS GGWMERTTVE DMDIAVRAHL RGWKFIFLND VECQCELPES YEAYRKQQHR WHSGPMQLFR LCLPDIIKCK IVFWKKANLI
401: FLFFLLRKLI LPFYSFTLFC IILPMTMFVP EAELPDWVVC YIPALMSLLN ILPSPKSFPF IIPYLLFENT MSVTKFNAMI SGLFQLGNAY EWVVTKKSGR
501: SSEGDLISLA PKELKHQKTE SAPNLDAIAK EQSAPRKDVK KKHNRIYKKE LALSLLLLTA AARSLLSKQG IHFYFLLFQG ISFLLVGLDL IGEQIE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.