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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, plasma membrane
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0766900-01 Rice golgi, plasma membrane 25.22 83.14
Bra000635.1-P Field mustard plasma membrane 98.77 80.92
CDX83148 Canola plasma membrane 98.59 80.78
CDY04011 Canola cytosol, peroxisome, plasma membrane 62.43 77.46
CDY00138 Canola cytosol, peroxisome, plasma membrane 62.26 77.24
AT4G07960.1 Thale cress plasma membrane 92.42 74.96
Os03t0770800-01 Rice plasma membrane 75.66 71.98
GSMUA_Achr6P30200_001 Banana cytosol 76.54 70.34
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 75.84 69.13
GSMUA_Achr5P01920_001 Banana plasma membrane 77.95 68.63
PGSC0003DMT400030125 Potato plasma membrane 79.89 68.02
KRH15467 Soybean plasma membrane 83.77 67.95
GSMUA_Achr7P00750_001 Banana plasma membrane 74.6 67.79
GSMUA_Achr4P32270_001 Banana plasma membrane 75.66 67.24
VIT_18s0001g08580.t01 Wine grape cytosol, peroxisome, plasma membrane 82.72 67.1
KRH52142 Soybean plasma membrane 82.89 66.57
KRH61452 Soybean plasma membrane 83.07 66.53
Solyc12g088240.1.1 Tomato cytosol, peroxisome, plasma membrane 79.37 65.41
Os05t0510800-01 Rice plasma membrane 77.78 64.1
KXG33450 Sorghum mitochondrion, peroxisome, plasma membrane 77.78 64.01
Zm00001d012666_P003 Maize plasma membrane 77.42 63.81
GSMUA_Achr4P23120_001 Banana cytosol, peroxisome, plasma membrane 78.84 63.49
EER90820 Sorghum plasma membrane 77.25 63.29
KXG22328 Sorghum plasma membrane 77.78 63.27
CDY57881 Canola extracellular 13.93 63.2
Zm00001d043336_P001 Maize plasma membrane 75.66 62.81
PGSC0003DMT400012668 Potato plasma membrane 81.66 62.4
Solyc04g077470.2.1 Tomato plasma membrane 81.66 62.4
HORVU3Hr1G074570.1 Barley plasma membrane 76.37 62.21
TraesCS5A01G405700.1 Wheat mitochondrion 76.9 62.02
TraesCS3B01G337100.1 Wheat plasma membrane 76.19 61.89
TraesCS3A01G299500.1 Wheat plasma membrane 76.54 61.65
Zm00001d034205_P001 Maize plasma membrane 77.07 61.64
Zm00001d038676_P001 Maize plasma membrane 76.01 61.4
TraesCS5B01G410400.1 Wheat mitochondrion 77.07 61.38
TraesCS3D01G302300.1 Wheat plasma membrane 76.19 61.36
Zm00001d013168_P001 Maize plasma membrane 74.07 61.22
CDX85189 Canola plasma membrane 70.37 60.73
CDX76802 Canola plasma membrane 70.55 60.61
CDX86448 Canola plasma membrane 70.19 60.58
TraesCS1B01G345400.1 Wheat plasma membrane 74.96 60.54
HORVU1Hr1G077230.2 Barley plasma membrane 74.6 60.52
CDY20029 Canola plasma membrane 70.02 60.33
TraesCS1A01G331800.1 Wheat plasma membrane 74.6 60.26
TraesCS1D01G334400.1 Wheat plasma membrane 74.6 60.26
HORVU1Hr1G067470.1 Barley plasma membrane 72.66 59.97
TraesCS1D01G312700.1 Wheat plasma membrane 72.84 59.86
TraesCS5D01G415700.1 Wheat mitochondrion 77.42 59.65
TraesCS1B01G324200.1 Wheat mitochondrion 72.49 59.57
Os07t0124750-00 Rice plasma membrane 74.96 59.44
TraesCS1A01G312600.1 Wheat mitochondrion, plasma membrane 72.31 59.42
CDX72314 Canola plasma membrane 71.25 59.06
CDY13445 Canola plasma membrane 70.9 58.52
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 70.55 58.48
KXG34323 Sorghum plasma membrane 69.49 57.77
CDX75177 Canola cytosol 29.28 57.04
CDY08003 Canola cytosol, peroxisome, plasma membrane 69.84 56.98
CDX74051 Canola cytosol, peroxisome, plasma membrane 69.84 56.65
CDX68766 Canola plasma membrane 71.96 52.65
CDY60854 Canola plasma membrane 72.13 46.74
CDY47369 Canola plasma membrane 24.69 46.67
CDY09672 Canola golgi 28.75 46.31
CDX70677 Canola cytosol, peroxisome, plasma membrane 35.27 45.15
CDX69464 Canola cytosol, peroxisome, plasma membrane 35.1 44.92
CDY47235 Canola plasma membrane 25.22 43.87
CDX78675 Canola plasma membrane 37.57 42.26
CDY11268 Canola plasma membrane 39.51 42.11
CDX70286 Canola plasma membrane 39.33 41.92
CDY10358 Canola plasma membrane 39.15 41.73
CDY32110 Canola mitochondrion 32.1 41.36
CDY35710 Canola plasma membrane 36.86 40.9
CDY09164 Canola plasma membrane 36.68 40.78
CDY26505 Canola plasma membrane 36.86 40.74
CDX79614 Canola plasma membrane 39.51 40.65
CDX88785 Canola plasma membrane 36.33 40.39
CDY26949 Canola plasma membrane 36.33 40.39
CDX71011 Canola plasma membrane 36.33 40.39
CDY44151 Canola plasma membrane 39.51 40.36
CDY04707 Canola plasma membrane 39.33 40.18
CDY54604 Canola plasma membrane 37.04 40.08
CDY01129 Canola plasma membrane 37.92 39.96
CDX72181 Canola plasma membrane 36.86 39.96
CDY32098 Canola plasma membrane 38.1 39.78
CDX90506 Canola plasma membrane 37.74 38.7
CDY40295 Canola plasma membrane 36.86 38.28
CDY68733 Canola plasma membrane 18.34 38.24
CDY40448 Canola plasma membrane 38.1 36.49
CDX80885 Canola plasma membrane 33.16 35.81
CDY32100 Canola cytosol 1.06 35.29
CDY47368 Canola endoplasmic reticulum, extracellular 3.35 32.76
CDX84607 Canola mitochondrion 6.17 29.17
CDX92340 Canola plasma membrane 36.68 22.01
Protein Annotations
EnsemblPlants:CDY34018EnsemblPlantsGene:GSBRNA2T00055882001Gene3D:3.90.550.10GO:A0A078HB49GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF45PFAM:PF13641
ProteinID:CDY34018ProteinID:CDY34018.1SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EDAE0A
UniProt:A0A078HB49MapMan:21.2.1.1.1::::
Description
BnaC03g27970DBnaC03g27970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB49]
Coordinates
chrLK032326:+:193244..195400
Molecular Weight (calculated)
65134.8 Da
IEP (calculated)
8.718
GRAVY (calculated)
0.066
Length
567 amino acids
Sequence
(BLAST)
001: MLLAFETAAY FKGWHFETPK LSLQLQLPYG FFDWVYTHWV LLRVGYLAPP LQFLANACIV LFLIQSLDRL ILCLGCFWIR FNKIKPVPKT AISDLETGES
101: GCFLPMVLVQ IPMCNEKEVY QQSIAAVCNL DWPKTKILIQ VLDDSDDPIT QSLIKEEVHK WQKGGARIVY RHRVNREGYK AGNLKSAMNC SYVKDYEFVA
201: IFDADFQPLP DFLKKTIPHF KDNEELGLVQ ARWSFVNKEE NLLTRLQNIN LAFHFEVEQQ VNSVFLNFFG FNGTAGVWRI KALEDSGGWL ERTTVEDMDI
301: AVRAHLHGWK FIFLNDVECI CELPESYEAY RKQQHRWHSG PMQLFRLCLP AVIKSKISIG KKFNLIFLFF LLRKLILPFY SFTLFCIILP MTMFVPEAEL
401: PAWVVCYIPA TMSFLNILPA PKSFPFIVPY LLFENTMSVT KFNAMVSGLF QLGSAYEWVV TKKSGRSSEG DLAALVENEG GKKMKHQRGA SAPAPETEAE
501: KKARKKNNKK KKKHNRIYMK ELSLAFLLLT AATRSLLSAQ GIHFYFLLFQ GISFLLVGLD LIGEQVE
Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)
001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
Arabidopsis Description
CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.