Factsheet for TraesCS1B01G324200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G312700.1	Wheat	plasma membrane	95.07	95.07
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	93.77	93.77
HORVU1Hr1G067470.1	Barley	plasma membrane	87.68	88.06
Os07t0124750-00	Rice	plasma membrane	80.58	77.76
GSMUA_Achr7P00750_001	Banana	plasma membrane	69.71	77.08
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.7	76.21
GSMUA_Achr4P32270_001	Banana	plasma membrane	70.29	76.02
KXG34323	Sorghum	plasma membrane	74.64	75.51
GSMUA_Achr5P01920_001	Banana	plasma membrane	70.0	75.0
TraesCS5B01G410400.1	Wheat	mitochondrion	76.96	74.58
GSMUA_Achr6P30200_001	Banana	cytosol	65.65	73.42
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	59.57	72.49
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	71.3	69.89
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.71	68.81
TraesCS3B01G337100.1	Wheat	plasma membrane	68.41	67.62
KRH15467	Soybean	plasma membrane	68.41	67.53
Bra000635.1-P	Field mustard	plasma membrane	67.68	67.49
CDX83148	Canola	plasma membrane	67.68	67.49
AT4G07960.1	Thale cress	plasma membrane	67.97	67.1
TraesCS1B01G345400.1	Wheat	plasma membrane	68.12	66.95
KRH61452	Soybean	plasma membrane	68.7	66.95
KRH52142	Soybean	plasma membrane	68.12	66.57
PGSC0003DMT400030125	Potato	plasma membrane	63.62	65.92
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	64.93	65.12
Solyc04g077470.2.1	Tomato	plasma membrane	67.1	62.4
PGSC0003DMT400012668	Potato	plasma membrane	66.96	62.26
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	60.29	55.39
TraesCS6B01G197200.1	Wheat	plasma membrane	33.48	44.59
TraesCS7B01G296000.1	Wheat	plasma membrane, plastid	33.04	43.68
TraesCS7B01G296100.1	Wheat	mitochondrion, plasma membrane	32.75	43.55
TraesCS7B01G295800.1	Wheat	plasma membrane	32.46	43.5
TraesCS3B01G054500.1	Wheat	cytosol, peroxisome, plasma membrane	23.91	40.44
TraesCS7B01G093900.1	Wheat	plasma membrane	31.74	40.04
TraesCS2B01G560100.1	Wheat	golgi	30.43	39.77
TraesCS7B01G494000.1	Wheat	golgi	30.0	39.5
TraesCS2B01G182700.3	Wheat	plasma membrane	33.04	39.24
TraesCS6B01G135100.1	Wheat	plastid	29.71	38.83
TraesCS3B01G540800.1	Wheat	plasma membrane	30.0	38.76
TraesCS3B01G558400.1	Wheat	plasma membrane	31.45	38.0
TraesCS3B01G090900.1	Wheat	cytosol, plasma membrane, plastid	9.71	31.75
TraesCS2B01G370500.1	Wheat	cytosol	5.22	25.53

Protein Annotations

EnsemblPlants:TraesCS1B01G324200.1	EnsemblPlantsGene:TraesCS1B01G324200	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044
PANTHER:PTHR32044:SF47	PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chr1B:+:549782044..549784746

Molecular Weight (calculated)

78848.2 Da

IEP (calculated)

9.131

GRAVY (calculated)

0.046

Length

690 amino acids

Sequence
(BLAST)

001: MAPWNSLWAG RAAIAGGNAY RDMPVIVKME NPNWSISEIN IDDDNSEDFL ARVGGQRRRV KNTKQITWVF RLKAHRAAGC LSWLTSAAFA LGGATRRRVV
101: AGRTDSNATD GECKDVEEWA PASRRSRFYT LIKACLMMFV CLLIVELAAY SNGKGNLAVF INSFNTSWIR FRAAYIAPPL QLLANACVVL FLVQSADRVF
201: QSLGCFYILV KRIKPKPLFL ALSDAEDPDA GYYPMVLVQI PMCNEKEVYR QSIAAVCNLD WPRSNFLVQV LDDSDDVTTQ ALIKDEVEKW RHSGAHIVYR
301: HRVLREGYKA GNLKSAMSCS YVKDYEYVAI FDADFQPYPD FLKRTVPHFK DNEDLGLVQA RWSFVNKDEN LLTRLQNINL CFHFEVEQQV NGVFINFFGF
401: NGTAGVWRIK AVEDSGGWME RTTVEDMDIA VRAHLKGWKF VFLNDVECQC ELPETYEAYR KQQHRWHSGP MQLFRLCLPD IIRCKIVFWK KANLIFLFFL
501: LRKLILPFYS FTLFCIILPM TMFVPEAELP DWVVCYIPVL MSFLNIAPAP KSFPFIIPYL LFENTMSVTK FNAMISGLFQ LGSTYEWVVT KKSGRSLEGD
601: LISLAPKGLK QLKYGSVPAI NVAIKEKLKA KKESKKYNRI YKKELAMSLL LLSAAIRSLL SKQGIHFYFL LFQGISFLLV GLDLIGQDIK

Best Arabidopsis Sequence Match ( AT2G24630.1 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.