Factsheet for GSMUA_Achr4P32270_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, golgi, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	89.66	91.96
GSMUA_Achr7P00750_001	Banana	plasma membrane	87.3	89.26
GSMUA_Achr5P01920_001	Banana	plasma membrane	88.87	88.04
GSMUA_Achr6P30200_001	Banana	cytosol	81.66	84.44
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	91.07	82.53
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	67.24	75.66
Os03t0770800-01	Rice	plasma membrane	69.59	74.5
Os01t0766900-01	Rice	golgi, plasma membrane	20.06	74.42
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	81.19	74.11
EER90820	Sorghum	plasma membrane	79.47	73.27
Zm00001d013168_P001	Maize	plasma membrane	78.68	73.18
GSMUA_Achr4P02100_001	Banana	plasma membrane	67.87	73.02
Os05t0510800-01	Rice	plasma membrane	78.21	72.53
GSMUA_Achr7P19790_001	Banana	mitochondrion	15.52	72.26
KRH61452	Soybean	plasma membrane	79.94	72.03
TraesCS5A01G405700.1	Wheat	mitochondrion	79.15	71.83
KRH52142	Soybean	plasma membrane	79.31	71.67
KRH15467	Soybean	plasma membrane	78.21	71.39
KXG22328	Sorghum	plasma membrane	77.74	71.16
TraesCS1D01G312700.1	Wheat	plasma membrane	76.96	71.16
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	76.8	71.12
Zm00001d034205_P001	Maize	plasma membrane	79.0	71.09
TraesCS5B01G410400.1	Wheat	mitochondrion	79.15	70.93
HORVU1Hr1G067470.1	Barley	plasma membrane	76.18	70.74
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	76.18	70.43
CDX83148	Canola	plasma membrane	76.33	70.38
Bra000635.1-P	Field mustard	plasma membrane	76.33	70.38
Zm00001d012666_P003	Maize	plasma membrane	75.86	70.35
TraesCS1B01G324200.1	Wheat	mitochondrion	76.02	70.29
KXG34323	Sorghum	plasma membrane	74.76	69.94
Os07t0124750-00	Rice	plasma membrane	78.37	69.93
Zm00001d043336_P001	Maize	plasma membrane	74.76	69.84
HORVU1Hr1G077230.2	Barley	plasma membrane	76.49	69.81
AT4G07960.1	Thale cress	plasma membrane	76.33	69.67
TraesCS3B01G337100.1	Wheat	plasma membrane	76.02	69.48
TraesCS1B01G345400.1	Wheat	plasma membrane	76.33	69.37
TraesCS1D01G334400.1	Wheat	plasma membrane	76.33	69.37
GSMUA_Achr7P19500_001	Banana	cytosol, peroxisome, plasma membrane	67.08	69.37
GSMUA_Achr4P05880_001	Banana	plasma membrane	65.2	69.33
HORVU3Hr1G074570.1	Barley	plasma membrane	75.55	69.25
Zm00001d038676_P001	Maize	plasma membrane	76.18	69.23
TraesCS1A01G331800.1	Wheat	plasma membrane	76.18	69.23
GSMUA_Achr6P01880_001	Banana	golgi, peroxisome, plasma membrane	68.34	69.21
TraesCS3D01G302300.1	Wheat	plasma membrane	76.02	68.89
TraesCS3A01G299500.1	Wheat	plasma membrane	75.86	68.75
TraesCS5D01G415700.1	Wheat	mitochondrion	79.31	68.75
PGSC0003DMT400030125	Potato	plasma membrane	71.47	68.47
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	73.51	68.17
GSMUA_Achr3P28000_001	Banana	plasma membrane	65.83	65.93
Solyc04g077470.2.1	Tomato	plasma membrane	76.33	65.63
PGSC0003DMT400012668	Potato	plasma membrane	75.86	65.23
GSMUA_Achr6P27800_001	Banana	plasma membrane	63.01	62.23
GSMUA_Achr11P...	Banana	plasma membrane	31.66	46.22
GSMUA_Achr9P26980_001	Banana	plasma membrane	20.53	43.81
GSMUA_Achr9P26970_001	Banana	endoplasmic reticulum, extracellular	13.01	43.68
GSMUA_Achr6P07540_001	Banana	plasma membrane	35.58	42.99
GSMUA_Achr2P20260_001	Banana	plasma membrane	35.58	42.59
GSMUA_Achr10P...	Banana	plasma membrane	35.58	42.59
GSMUA_Achr10P...	Banana	plasma membrane	35.11	42.59
GSMUA_Achr6P02600_001	Banana	extracellular, plasma membrane	31.66	41.48
GSMUA_Achr6P13400_001	Banana	plasma membrane	34.95	41.14
GSMUA_AchrUn_...	Banana	plasma membrane	33.86	41.06
GSMUA_Achr7P21070_001	Banana	plasma membrane	31.82	38.16
GSMUA_Achr7P18150_001	Banana	plasma membrane	31.82	37.45
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, vacuole	31.19	37.2
GSMUA_Achr5P15920_001	Banana	plasma membrane	34.8	37.0
GSMUA_Achr3P01830_001	Banana	cytosol, peroxisome, plasma membrane	34.95	33.04

Protein Annotations

EnsemblPlants:GSMUA_Achr4P32270_001	EnsemblPlants:GSMUA_Achr4T32270_001	EnsemblPlantsGene:GSMUA_Achr4G32270_001	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF45	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000296FC22	UniProt:M0STY9	MapMan:21.2.1.1.1

Description

Probable xyloglucan glycosyltransferase 12 [Source:GMGC_GENE;Acc:GSMUA_Achr4G32270_001]

Coordinates

chr4:+:29112312..29116463

Molecular Weight (calculated)

72412.6 Da

IEP (calculated)

6.964

GRAVY (calculated)

-0.021

Length

638 amino acids

Sequence
(BLAST)

001: MAPSFGWWDR EAHRGTPVIV KMENPNWSIA EISSPDDDEY GAGEEFAVPG GGARKGARGK NAKQITWVLL LKAHRAAGCL TYLASAAVGL ASAVRRRVVS
101: GRTDSDAASS LPEESPMHRL VLPSSLGVRG LLESLYTGWV RFRVEYIAPP LQFLTDACVI LFLIQSADRL ILCLGCFWIR FKGIEPLPKR SIGASEDPES
201: GGEDYPMVLV QIPMCNEKEV YQQSIAAVCN LDWPRSNILI QVLDDSDDPT TQALIKEEVE KWQQNGAHIV YRHRVIRDGY KAGNLKSAMN CSYVKDYELV
301: AIFDADFQPT PDFLKRTVPH FKDNEELGLV QARWSFVNKD ENLLTRLQNI NLCFHFEVEQ QVNGVFINFF GFNGTAGVWR IKALEDAGGW LERTTVEDMD
401: IAVRAHLKGW KFIYLNDVEC QCELPESYEA YRKQQHRWHS GPMQLFRLCL PDIIRSKIGF WKKSNLIFLF FLLRKLILPF YSFTLFCIIL PLTMFVPEAE
501: LPAWVVCYIP AAMSFLNILP ALRSFPFIVP YLLFENTMSV TKFNAMISGL FQLGSAYEWV VTKKSGRSSE GDHELEPKKE SKKKHNRIYR KELALAFLLL
601: TASARSLLSA QGIHFYFLLF QGISFLLVGL DLIGEQID

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.