Factsheet for HORVU1Hr1G067470.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G312700.1	Wheat	plasma membrane	89.67	89.28
TraesCS1B01G324200.1	Wheat	mitochondrion	88.06	87.68
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	88.06	87.68
Os07t0124750-00	Rice	plasma membrane	82.82	79.58
GSMUA_Achr7P00750_001	Banana	plasma membrane	70.01	77.08
KXG34323	Sorghum	plasma membrane	75.69	76.25
GSMUA_Achr4P32270_001	Banana	plasma membrane	70.74	76.18
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.12	75.24
GSMUA_Achr5P01920_001	Banana	plasma membrane	69.72	74.38
GSMUA_Achr6P30200_001	Banana	cytosol	66.08	73.58
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	59.97	72.66
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	72.49	70.74
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.72	68.53
HORVU1Hr1G077230.2	Barley	plasma membrane	69.14	67.95
Bra000635.1-P	Field mustard	plasma membrane	68.27	67.77
KRH15467	Soybean	plasma membrane	68.85	67.67
CDX83148	Canola	plasma membrane	68.12	67.63
HORVU3Hr1G074570.1	Barley	plasma membrane	68.27	67.39
PGSC0003DMT400030125	Potato	plasma membrane	65.07	67.12
AT4G07960.1	Thale cress	plasma membrane	68.27	67.1
KRH61452	Soybean	plasma membrane	69.14	67.09
KRH52142	Soybean	plasma membrane	68.41	66.57
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.23	66.13
PGSC0003DMT400012668	Potato	plasma membrane	67.83	62.8
Solyc04g077470.2.1	Tomato	plasma membrane	67.54	62.53
HORVU3Hr1G000340.2	Barley	plasma membrane	55.02	58.51
HORVU4Hr1G037380.1	Barley	cytosol, extracellular, mitochondrion, nucleus	7.13	49.0
HORVU7Hr1G092910.2	Barley	plasma membrane	33.04	44.08
HORVU6Hr1G034630.10	Barley	plasma membrane	33.19	44.02
HORVU7Hr1G092990.4	Barley	endoplasmic reticulum	29.55	42.56
HORVU2Hr1G028380.1	Barley	golgi, plasma membrane	31.3	39.52
HORVU7Hr1G038440.1	Barley	cytosol, nucleus	31.3	37.79
HORVU3Hr1G109930.14	Barley	plasma membrane	31.15	37.74
HORVU6Hr1G018840.1	Barley	plastid	29.69	37.23
HORVU3Hr1G107340.2	Barley	plasma membrane	28.68	36.48
HORVU4Hr1G000610.1	Barley	endoplasmic reticulum, plasma membrane, plastid	30.42	35.67
HORVU3Hr1G002660.1	Barley	endoplasmic reticulum, plasma membrane	30.13	35.57

Protein Annotations

EnsemblPlants:HORVU1Hr1G067470.1	EnsemblPlantsGene:HORVU1Hr1G067470	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044	PANTHER:PTHR32044:SF47	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000B472538	UniProt:A0A287G208	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chrchr1H:-:478192712..478195887

Molecular Weight (calculated)

78475.7 Da

IEP (calculated)

8.525

GRAVY (calculated)

0.047

Length

687 amino acids

Sequence
(BLAST)

001: MAPWDGFWAG RAAIAGGNAY RDMPVIVKME NPNWSIPEID DGGDDNEDLF ARAGGQRRRV KNVKQITWVF LLKAHRAAGC LAWLASAAVA LGGTARRRVA
101: IGRTDSGDTD AEYEERTAAP RRSRFYMLIK ASLLMSIFLL LVELAAYYNV RGCLAVFVES FYTPWIHFRV TYVAPPLQLL ADTCVVLFLV QSVDRLVQSL
201: GCLYILVKRI KPKLVAPALC DAEDPDAGYY PMVLVQIPMC NEKEVYQHSI AAVCNLDWPR SNFLIQVLDD SDDLTTQALI KDEVEKWRHN GARIVYHHRV
301: LREGYKAGNL KSAMSCDYVK DYEYVAIFDA DFQPYPDFLK RTVPHFKDNE DLGLVQARWS FVNKDENLLT RLQYINLCFH FEVEQQVNGV FINFFGFNGT
401: AGVWRIKAVE DSGGWMERTT VEDMDIAVRA HLKGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPDIIR CKIVFWKKAN LIFLFFLLRK
501: LILPFYSFTL FCIILPMTMF VPEAELPDWV VCYIPALMSF LNIAPAPKSF PFIIPYLLFE NTMSVTKFNA MISGLFQLGS TYEWVVTKKS GRSLEGDLIA
601: SAPKGLKQLK YGSVPSINVG IKEQSKAKRE SKKYNRIYKK ELALSLLLLS AATRSLLSKQ GIHFYFLLFQ GISFLLVGLD LIGRDVK

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.