Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G027600.1 | Wheat | plasma membrane | 88.66 | 90.53 |
| TraesCS3A01G019200.1 | Wheat | plasma membrane | 86.94 | 89.72 |
| TraesCS3D01G015000.1 | Wheat | plasma membrane | 87.11 | 89.26 |
| TraesCSU01G046600.1 | Wheat | plasma membrane | 86.94 | 88.77 |
| TraesCS3B01G054500.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.51 | 87.75 |
| HORVU3Hr1G109930.14 | Barley | plasma membrane | 84.88 | 87.13 |
| Zm00001d032188_P001 | Maize | plasma membrane | 74.74 | 76.32 |
| Zm00001d050406_P008 | Maize | plasma membrane | 72.85 | 75.31 |
| KXG25219 | Sorghum | plasma membrane | 74.74 | 75.13 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 55.15 | 62.33 |
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 50.34 | 61.43 |
| HORVU6Hr1G034630.10 | Barley | plasma membrane | 53.26 | 59.85 |
| HORVU6Hr1G018840.1 | Barley | plastid | 51.89 | 55.11 |
| HORVU4Hr1G037380.1 | Barley | cytosol, extracellular, mitochondrion, nucleus | 9.28 | 54.0 |
| HORVU7Hr1G038440.1 | Barley | cytosol, nucleus | 52.06 | 53.25 |
| HORVU3Hr1G107340.2 | Barley | plasma membrane | 45.53 | 49.07 |
| HORVU2Hr1G028380.1 | Barley | golgi, plasma membrane | 45.7 | 48.9 |
| HORVU4Hr1G000610.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 46.56 | 46.25 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 35.22 | 31.73 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 36.08 | 30.17 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 35.57 | 30.13 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 35.4 | 29.47 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G002660.1 | EnsemblPlantsGene:HORVU3Hr1G002660 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | PFAM:PF13641 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000B470D18 | UniProt:A0A287JXP6 | MapMan:21.2.3.1.1.1 | : |
Description
No Description!
Coordinates
chrchr3H:+:6808887..6812817
Molecular Weight (calculated)
65712.1 Da
IEP (calculated)
7.156
GRAVY (calculated)
0.172
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: LLARSGAGEE VMAATAGLWA QVPVRVRVDW AAMASQCALA GEQARVFLVV PAVRLLVLLS LAMTVMILLE KLFVAAVCYA AKAFGHRPER RYRWRPIATS
101: ACKTGGDDEE DGIVVVGSSS GSEEFPMVLV QIPMYNEREV VYKVSIGAAC ALEWPSGRMV IQVLDDSTDP VVKDMVKTEC QRWKGKGVNI RYEVRGNRKG
201: YKAGALKRGM THDYVQECEF VAMFDADFQP ESDFLLRTVP FLVHNPDIAL VQTRWKFVNS DECLLTRFQE MSLDYHFKFE QEAGSLVYSF FGFNGTAGVW
301: RISAINDSGG WKDRTTVEDM DLAVRTALLG LKFVYVGTVK VRSELPSTFK AYRFQQHRWS CGPANLFKKM LVEILENKRV SFWSKLHMLY DFFFVGKIAA
401: HTVTFIYYCF VIPVSVFFPE IQIPLWGVVY VPTVITLCKA LGSPSSFHLV ILWVLFENVM SLHRIKATIT GLLETGRVNE WIVTEKLGDA NKANQDMEGL
501: DVVEVIDVEL TTPLVPKLEK RQTRLWDKYN CSEIFVGTCI IICGCYDVLY ANKGYYIYLF IQGLAFLIVG FEYIGTRPPS AE
101: ACKTGGDDEE DGIVVVGSSS GSEEFPMVLV QIPMYNEREV VYKVSIGAAC ALEWPSGRMV IQVLDDSTDP VVKDMVKTEC QRWKGKGVNI RYEVRGNRKG
201: YKAGALKRGM THDYVQECEF VAMFDADFQP ESDFLLRTVP FLVHNPDIAL VQTRWKFVNS DECLLTRFQE MSLDYHFKFE QEAGSLVYSF FGFNGTAGVW
301: RISAINDSGG WKDRTTVEDM DLAVRTALLG LKFVYVGTVK VRSELPSTFK AYRFQQHRWS CGPANLFKKM LVEILENKRV SFWSKLHMLY DFFFVGKIAA
401: HTVTFIYYCF VIPVSVFFPE IQIPLWGVVY VPTVITLCKA LGSPSSFHLV ILWVLFENVM SLHRIKATIT GLLETGRVNE WIVTEKLGDA NKANQDMEGL
501: DVVEVIDVEL TTPLVPKLEK RQTRLWDKYN CSEIFVGTCI IICGCYDVLY ANKGYYIYLF IQGLAFLIVG FEYIGTRPPS AE
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.