Factsheet for Zm00001d032188_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25219	Sorghum	plasma membrane	91.58	90.16
Zm00001d050406_P008	Maize	plasma membrane	88.95	90.05
TraesCS3B01G054500.1	Wheat	cytosol, peroxisome, plasma membrane	57.19	79.9
HORVU3Hr1G109930.14	Barley	plasma membrane	79.47	79.89
TraesCS3B01G558400.1	Wheat	plasma membrane	80.0	79.86
TraesCS3D01G504200.1	Wheat	plasma membrane	79.82	79.55
TraesCS3A01G496400.1	Wheat	plasma membrane	79.82	79.41
TraesCS3D01G027600.1	Wheat	plasma membrane	77.02	77.02
TraesCS3A01G019200.1	Wheat	plasma membrane	76.14	76.95
TraesCSU01G046600.1	Wheat	plasma membrane	75.44	75.44
HORVU3Hr1G002660.1	Barley	endoplasmic reticulum, plasma membrane	76.32	74.74
TraesCS3D01G015000.1	Wheat	plasma membrane	74.39	74.65
Zm00001d010680_P002	Maize	cytosol	10.88	71.26
Zm00001d009569_P001	Maize	cytosol	12.81	67.59
Zm00001d046681_P001	Maize	plasma membrane	58.25	63.12
Zm00001d032994_P002	Maize	plasma membrane	54.04	59.92
Zm00001d043714_P001	Maize	cytosol	38.25	55.9
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	52.63	55.56
Zm00001d048319_P003	Maize	plasma membrane	53.51	54.95
Zm00001d053696_P003	Maize	plasma membrane	54.56	54.75
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	51.58	54.75
Zm00001d018032_P001	Maize	plasma membrane	50.7	53.12
Zm00001d043719_P001	Maize	plasma membrane	17.54	50.76
Zm00001d005305_P001	Maize	plasma membrane	19.65	49.56
Zm00001d022230_P001	Maize	vacuole	47.37	47.12
Zm00001d013168_P001	Maize	plasma membrane	38.07	31.63
Zm00001d012666_P003	Maize	plasma membrane	37.72	31.25
Zm00001d043336_P001	Maize	plasma membrane	37.02	30.89
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	37.54	30.62
Zm00001d034205_P001	Maize	plasma membrane	37.89	30.47
Zm00001d038676_P001	Maize	plasma membrane	37.02	30.06
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	36.49	27.48
Zm00001d049336_P001	Maize	plasma membrane	36.14	26.96
Zm00001d010955_P001	Maize	extracellular	6.14	18.92

Protein Annotations

EnsemblPlants:Zm00001d032188_P001	EnsemblPlants:Zm00001d032188_T001	EnsemblPlantsGene:Zm00001d032188	EntrezGene:100216582	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF21
PFAM:PF13641	ProteinID:ONM04546.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000221800C
UniProt:A0A1D6KP12	MapMan:21.2.3.1.1.1	:	:	:	:

Description

Probable mannan synthase 7

Coordinates

chr1:+:216280294..216286285

Molecular Weight (calculated)

63789.7 Da

IEP (calculated)

8.342

GRAVY (calculated)

0.242

Length

570 amino acids

Sequence
(BLAST)

001: MGGVRGHSSA AGVSEEAAAA AAWVWAAADL PVRVDWAGAA AQCASLWAHA RALLVVPAVR LLVALSLAMT VMVLAEKLFV CAVCVAVRAF RLGPHRRYRW
101: EPIAAAAAAV GYPVVLVQIP MYNEREVYKL SIGAACALEW PPERFVIQVL DDSTDPVVKD LVETECQRWK SKGVNIKYEV RGNRKGYKAG ALKEGLKHDY
201: VADCEYIAMF DADFQPDSDF LLRTIPFLVH NPEIALVQAR WKFVNSDECL LTRFQEMSLD YHFKYEQEAG SSVYSFFGFN GTAGVWRISA IDDAGGWKDR
301: TTVEDMDLAV RAMLQGWKFL YVGDIKVKSE LPSTFKAYRF QQHRWSCGPA NLFKKMMVEI LENKRVSLWS KIHLWYDFFF VGKVAAHTVT FIYYCFAIPV
401: SVLFPEIQIP LWGVVYVPTV ITLLKALGTP SSFHLVILWV LFENVMSLHR IKAAVSGLLD AGGRVNEWVV TEKLGDTSKA KPGTNGSDTA VKVIDVKLTE
501: PLVPKLVKRR ARFWERYHCS ELFVGTCIIL CGFYDLLFAN KGYYIFLFLQ GTAFLVVGFG YVGTLPPCTA

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.