Factsheet for Zm00001d043336_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012666_P003	Maize	plasma membrane	92.39	91.72
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	91.65	90.86
Os01t0766900-01	Rice	golgi, plasma membrane	22.69	90.12
TraesCS3B01G337100.1	Wheat	plasma membrane	86.53	84.67
TraesCS3A01G299500.1	Wheat	plasma membrane	86.68	84.09
HORVU3Hr1G074570.1	Barley	plasma membrane	85.65	84.05
TraesCS3D01G302300.1	Wheat	plasma membrane	86.53	83.95
Zm00001d038676_P001	Maize	plasma membrane	83.31	81.05
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	69.99	76.85
GSMUA_Achr7P00750_001	Banana	plasma membrane	69.4	75.96
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	62.81	75.66
GSMUA_Achr6P30200_001	Banana	cytosol	67.94	75.2
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.84	74.76
GSMUA_Achr5P01920_001	Banana	plasma membrane	70.42	74.69
Zm00001d013168_P001	Maize	plasma membrane	72.62	72.3
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	73.79	71.59
Zm00001d034205_P001	Maize	plasma membrane	74.23	71.51
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.77	71.1
KRH15467	Soybean	plasma membrane	71.89	70.24
Bra000635.1-P	Field mustard	plasma membrane	70.42	69.51
CDX83148	Canola	plasma membrane	70.42	69.51
KRH52142	Soybean	plasma membrane	71.6	69.26
KRH61452	Soybean	plasma membrane	71.45	68.93
AT4G07960.1	Thale cress	plasma membrane	70.28	68.67
PGSC0003DMT400030125	Potato	plasma membrane	66.76	68.47
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	68.52	68.02
Solyc04g077470.2.1	Tomato	plasma membrane	70.86	65.23
PGSC0003DMT400012668	Potato	plasma membrane	70.72	65.09
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	61.79	60.37
Zm00001d049336_P001	Maize	plasma membrane	63.25	56.54
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	62.66	56.54
Zm00001d009569_P001	Maize	cytosol	8.2	51.85
Zm00001d010680_P002	Maize	cytosol	6.0	47.13
Zm00001d046681_P001	Maize	plasma membrane	32.36	42.02
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	32.94	41.9
Zm00001d032994_P002	Maize	plasma membrane	31.33	41.63
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	32.65	41.3
Zm00001d043714_P001	Maize	cytosol	23.57	41.28
Zm00001d053696_P003	Maize	plasma membrane	33.67	40.49
Zm00001d048319_P003	Maize	plasma membrane	31.63	38.92
Zm00001d022230_P001	Maize	vacuole	32.5	38.74
Zm00001d050406_P008	Maize	plasma membrane	31.92	38.72
Zm00001d018032_P001	Maize	plasma membrane	30.45	38.24
Zm00001d032188_P001	Maize	plasma membrane	30.89	37.02
Zm00001d010955_P001	Maize	extracellular	9.96	36.76
Zm00001d005305_P001	Maize	plasma membrane	10.54	31.86
Zm00001d043719_P001	Maize	plasma membrane	9.08	31.47

Protein Annotations

EnsemblPlants:Zm00001d043336_P001	EnsemblPlants:Zm00001d043336_T001	EnsemblPlantsGene:Zm00001d043336	EntrezGene:100383102	Gene3D:3.90.550.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF46	PFAM:PF13641	ProteinID:ONM37603.1	SEG:seg
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00077FC89F	UniProt:A0A1D6NAN7	MapMan:21.2.1.1.1	:

Description

Probable xyloglucan glycosyltransferase 12

Coordinates

chr3:+:197009472..197013137

Molecular Weight (calculated)

76542.8 Da

IEP (calculated)

8.575

GRAVY (calculated)

0.035

Length

683 amino acids

Sequence
(BLAST)

001: MVQWWGREAS GGRGTSVVVK MESPEWTIPA ESEVAAGGKA GRGKNARQIT WVLLLKAHRT AGKLTGAASA VLSIAGAAWR RVAAGRTDED EDEDAGAAPP
101: GESPALRSRF YGFLRASLVL SVLLLAADVA AHLQGWHLAV DVPDLLAVEG LFAAGYASWA RVRLEYLAPA LQFLANACVV LFLVQSADRL ILCLGCLWIK
201: HRGIRPVPKA GGKGSDDVEA GTGNFPMVLV QIPMRNEKEV YQQSIGAVCG LDWPRPNFLV QVLDDSDDAA TSTLIKEEVE KWQREGVRIL YRHRLIRDGY
301: KAGNLKSAMN CSYVKDYEFV VIFDADFQPQ PDFLKRTVPH FKGNEDVGLV QARWSFVNKD ENLLTRLQNI NLCFHFEVEQ QVNGIFLNFF GFNGTAGVWR
401: IKALEDSGGW MERTTVEDMD IAVRAHLKGW KFLFLNDVEC QCELPESYEA YRKQQHRWHS GPMQLFRLCF VDIIKSKIGF WKKFNLIFLF FLLRKLILPF
501: YSFTLFCIIL PMTMFIPEAE LPAWVVCYIP ATMSLLNILP APKSFPFIVP YLLFENTMSV TKFNAMVSGL FQLGSAHEWV VTKKSGRSSE GDLVVEKQPR
601: QQRAGSASNL GSLAKEPSSS LRKDSQRKKH NRIYRKELAL SFLLLTAAAR SLISVQGIHF YFLLFQGVSF LVVGLDLIGE QVE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.