Factsheet for Zm00001d049336_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	94.11	94.98
KXG24822	Sorghum	peroxisome	93.85	94.34
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	56.41	89.98
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	79.97	81.36
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	79.71	81.2
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	80.5	81.13
HORVU3Hr1G000340.2	Barley	plasma membrane	68.46	80.96
KRH52609	Soybean	plasma membrane	65.05	71.72
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	64.92	71.57
KRH61950	Soybean	plasma membrane	64.92	71.57
CDX76802	Canola	plasma membrane	61.78	71.52
VIT_04s0069g00780.t01	Wine grape	plasma membrane	64.79	71.33
CDX72314	Canola	plasma membrane	63.35	70.76
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	61.13	70.76
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	63.48	70.29
AT4G31590.1	Thale cress	plasma membrane	63.61	70.23
Bra023993.1-P	Field mustard	plasma membrane	61.13	70.23
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	62.83	70.18
CDY13445	Canola	plasma membrane	62.96	70.01
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	63.35	69.74
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	62.96	69.31
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	62.83	68.67
KRH16165	Soybean	plasma membrane	61.78	68.11
KRH04930	Soybean	plasma membrane	61.39	67.68
Zm00001d012666_P003	Maize	plasma membrane	57.59	63.95
Zm00001d038676_P001	Maize	plasma membrane	58.25	63.39
Zm00001d043336_P001	Maize	plasma membrane	56.54	63.25
CDY57881	Canola	extracellular	10.34	63.2
Zm00001d034205_P001	Maize	plasma membrane	58.64	63.19
Zm00001d013168_P001	Maize	plasma membrane	56.54	62.97
CDX68766	Canola	plasma membrane	63.61	62.71
Zm00001d009569_P001	Maize	cytosol	7.85	55.56
CDY60854	Canola	plasma membrane	63.61	55.54
Bra011284.1-P	Field mustard	plasma membrane	63.35	49.85
Zm00001d010680_P002	Maize	cytosol	5.63	49.43
KRH57821	Soybean	plasma membrane	14.92	47.3
Zm00001d010955_P001	Maize	extracellular	10.47	43.24
Zm00001d046681_P001	Maize	plasma membrane	28.53	41.44
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	28.53	40.37
Zm00001d032994_P002	Maize	plasma membrane	26.96	40.08
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	28.14	40.04
Zm00001d043714_P001	Maize	cytosol	20.42	40.0
Zm00001d022230_P001	Maize	vacuole	29.58	39.44
Zm00001d053696_P003	Maize	plasma membrane	28.66	38.56
Zm00001d018032_P001	Maize	plasma membrane	26.96	37.87
Zm00001d050406_P008	Maize	plasma membrane	27.62	37.48
Zm00001d048319_P003	Maize	plasma membrane	26.96	37.12
Zm00001d032188_P001	Maize	plasma membrane	26.96	36.14
Zm00001d043719_P001	Maize	plasma membrane	7.98	30.96
Zm00001d005305_P001	Maize	plasma membrane	8.9	30.09

Protein Annotations

EnsemblPlants:Zm00001d049336_P001	EnsemblPlants:Zm00001d049336_T001	EnsemblPlantsGene:Zm00001d049336	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641	ProteinID:AQK50056.1	SEG:seg	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI0002218566	UniProt:K7TSM8	MapMan:21.2.1.1.1	:	:

Description

Xyloglucan glycosyltransferase 4

Coordinates

chr4:+:27048627..27053221

Molecular Weight (calculated)

86813.6 Da

IEP (calculated)

8.511

GRAVY (calculated)

-0.073

Length

764 amino acids

Sequence
(BLAST)

001: MAPPPSSWWG SEEQRGTPVV VKMDNPYSLV EIDGPGMPPS DKARGKNAKQ FTWVLLLRAH RAVGCVAWLA GGFWGVLGAV NRRVRRSRDA DDEPDAEASG
101: RGRVMLRFLR AFLLLSLAML AFETVAHLKG WQFPQHLMPG NLQELEEQLQ HLPEHLRHLP ENLRQLPDHL RVPERQEIQG WLHRAYVAWL EFRVDYIAWA
201: IQKLSTFCIL LFMVQSVDRI VQCLACFWIK IRGIKPRIPA SAGGKPRGGT TGRKRVDDVE NGDADDDRYF PMVLVQMPMC NEKEVYETSI SHVCQMDWPR
301: DRLLIQVLDD SDDEVCQMLI KAEVTKWSQR GVNVIYRHRL SRTGYKAGNL KSAMACDYVK DYEFVAIFDA DFQPNPDFLK LTVPHFKENP ELGLVQARWS
401: FVNKDENLLT RLQNINLCFH FEVEQQVNGV YLNFFGFNGT AGVWRIKALE DSGGWMERTT VEDMDIAVRA HLNGWKFIFL NDVKVLCELP ESYEAYRKQQ
501: HRWHSGPMQL FRLCIPTVFR SKIPFWKKAN LVMLFFLLRK LVLPFYSFTL FCVILPLTMF VPEAELPIWV ICYIPVLMSI LNILPAPKSF PFIIPYLLFE
601: NTMSVTKFNA MVSGLFQLGS SYEWIVTKKA GRTSSASDIL ALAEADAHAH APAPAAKLVR GVSEGGLQEW GRLREQEAAE WANKEDAAAA LAAAAAPATP
701: KKSSNKAKKP PNRIFKKELA LACLLLTAAT RSLLSKQGLH FYFLLFQGVT FLAVGLDLIG EQVS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.