CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

cytosol 1
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, peroxisome
BaCelLo:	cytosol
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	95.76	99.24
CDX76802	Canola	plasma membrane	93.86	97.27
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	93.13	92.32
CDY13445	Canola	plasma membrane	87.43	87.05
CDX72314	Canola	plasma membrane	86.7	86.7
VIT_04s0069g00780.t01	Wine grape	plasma membrane	79.97	78.82
CDY04011	Canola	cytosol, peroxisome, plasma membrane	52.49	78.56
CDY00138	Canola	cytosol, peroxisome, plasma membrane	52.34	78.34
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	54.09	77.24
CDX68766	Canola	plasma membrane	86.84	76.65
KRH61950	Soybean	plasma membrane	77.49	76.48
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	77.34	76.33
KRH52609	Soybean	plasma membrane	77.05	76.05
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	75.73	74.64
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	75.58	74.5
KRH16165	Soybean	plasma membrane	75.44	74.46
KRH04930	Soybean	plasma membrane	74.56	73.59
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	58.48	70.55
CDY57881	Canola	extracellular	12.87	70.4
CDX85189	Canola	plasma membrane	65.5	68.19
CDX86448	Canola	plasma membrane	65.35	68.04
CDY20029	Canola	plasma membrane	65.35	67.93
CDY60854	Canola	plasma membrane	86.7	67.77
CDX83148	Canola	plasma membrane	66.81	66.04
HORVU3Hr1G000340.2	Barley	plasma membrane	62.13	65.79
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	69.74	63.52
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	69.59	63.47
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	69.59	62.88
Zm00001d049336_P001	Maize	plasma membrane	70.18	62.83
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	69.59	62.8
KXG24822	Sorghum	peroxisome	69.59	62.63
CDY08003	Canola	cytosol, peroxisome, plasma membrane	60.38	59.42
CDX74051	Canola	cytosol, peroxisome, plasma membrane	60.23	58.94
KRH57821	Soybean	plasma membrane	20.76	58.92
CDY47235	Canola	plasma membrane	26.17	54.91
CDX75177	Canola	cytosol	20.91	49.14
CDY09672	Canola	golgi	23.1	44.89
CDX69464	Canola	cytosol, peroxisome, plasma membrane	28.95	44.7
CDY47369	Canola	plasma membrane	19.59	44.67
CDY11268	Canola	plasma membrane	34.65	44.55
CDY10358	Canola	plasma membrane	34.65	44.55
CDX70677	Canola	cytosol, peroxisome, plasma membrane	28.8	44.47
CDX70286	Canola	plasma membrane	34.5	44.36
CDX79614	Canola	plasma membrane	33.77	41.92
CDY26505	Canola	plasma membrane	31.29	41.72
CDX78675	Canola	plasma membrane	30.7	41.67
CDY32110	Canola	mitochondrion	26.75	41.59
CDY35710	Canola	plasma membrane	30.99	41.49
CDY32100	Canola	cytosol	1.02	41.18
CDX88785	Canola	plasma membrane	30.7	41.18
CDY26949	Canola	plasma membrane	30.56	40.98
CDX71011	Canola	plasma membrane	30.56	40.98
CDY09164	Canola	plasma membrane	30.56	40.98
CDY32098	Canola	plasma membrane	32.46	40.88
CDY01129	Canola	plasma membrane	32.02	40.71
CDX72181	Canola	plasma membrane	30.99	40.54
CDY54604	Canola	plasma membrane	30.99	40.46
CDY04707	Canola	plasma membrane	32.46	40.0
CDY44151	Canola	plasma membrane	32.46	40.0
CDY40295	Canola	plasma membrane	31.87	39.93
CDY47368	Canola	endoplasmic reticulum, extracellular	3.36	39.66
CDX90506	Canola	plasma membrane	30.7	37.97
CDY40448	Canola	plasma membrane	32.6	37.67
CDY68733	Canola	plasma membrane	14.77	37.13
CDX80885	Canola	plasma membrane	28.07	36.57
CDX84607	Canola	mitochondrion	4.82	27.5
CDX92340	Canola	plasma membrane	30.56	22.12

Protein Annotations

EnsemblPlants:CDY34762	EnsemblPlantsGene:GSBRNA2T00057303001	Gene3D:3.90.550.10	GO:A0A078HAJ7	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641
ProteinID:CDY34762	ProteinID:CDY34762.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0004EEF3A3
UniProt:A0A078HAJ7	MapMan:21.2.1.1.1	:	:	:	:

Description

BnaA09g41290DBnaA09g41290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAJ7]

Coordinates

chrLK032341:+:139839..142472

Molecular Weight (calculated)

78413.0 Da

IEP (calculated)

8.544

GRAVY (calculated)

0.093

Length

684 amino acids

Sequence
(BLAST)

001: MAPRFGFSDL WAKETRKGTP VVVTMENPNY SIVEVDEPES AFRPMERTRG KNAKQVTWVL LLQAHKAVGC LTWLATAFWS LLGSVKRRLC FTHRLGSERL
101: GRDRWLFSAI KLFLAASLSV LGFELVAYYK GWHYFKNIPT SKLEIQSLFH LLYVGWLSLR ADYIAPPVKA LSKLCIVLFL VQSVDRLILC LGCFWIKYKK
201: IKPRIDEEPF GNDDVEGSGS EYPMVLVQIP MCNEREVYEQ SISAVCQLDW PKDRMLIQVL DDSDDGSIQE LIRAEVTKWS QKGVNIIYRH RLVRTGYKAG
301: NLKSAMSCDY VEAYEFVAIF DADFQPNSDF LKLTVPHFKE KPELGLVQAR WAFVNKDENL LTRLQNINLC FHFEVEQQVN GVFLNFFGFN GTAGVWRIKA
401: LEESGGWLER TTVEDMDIAV RAHLHGWKFI YLNDVKVLCE VPESYEAYKK QQHRWHSGPM QLFRLCLGAI LTSKIAMWKK ANLILLFFLL RKLILPFYSF
501: TLFCVILPIT MFVPEAELPV WVICYVPIFM SLLNVLPAPK SFPFIVPYLL FENTMSVTKF NAMVSGLFQL GSSYEWIVTK KAGRSSESDL LGLTDKRMPP
601: NQMQRGASES ELLEISQAEE QKKQTVAVKK TNKIFHKELA LAFLLLTAAV RSLLASQGVH FYFLLFQGLT FLLVGLDLIG EQMS

Best Arabidopsis Sequence Match ( AT2G24630.2 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.