Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68733 Canola plasma membrane 58.33 64.34
CDX69464 Canola cytosol, peroxisome, plasma membrane 83.67 56.66
CDX70677 Canola cytosol, peroxisome, plasma membrane 83.0 56.21
CDY01129 Canola plasma membrane 93.67 52.23
AT4G13410.1 Thale cress extracellular, plasma membrane 89.0 49.72
CDX78675 Canola plasma membrane 83.33 49.6
CDY26505 Canola plasma membrane 83.67 48.93
CDY40295 Canola plasma membrane 78.0 42.86
CDY32110 Canola mitochondrion 59.67 40.68
CDY09672 Canola golgi 46.67 39.77
CDX90506 Canola plasma membrane 70.33 38.16
CDY09164 Canola plasma membrane 63.0 37.06
CDY26949 Canola plasma membrane 63.0 37.06
CDY35710 Canola plasma membrane 63.0 36.99
Os02t0744650-00 Rice cytosol, mitochondrion, peroxisome, plasma membrane 49.33 36.91
CDX88785 Canola plasma membrane 62.67 36.86
CDX71011 Canola plasma membrane 62.67 36.86
CDY44151 Canola plasma membrane 68.0 36.76
CDY04707 Canola plasma membrane 67.67 36.58
CDY11268 Canola plasma membrane 63.33 35.71
CDX72181 Canola plasma membrane 62.0 35.56
CDY10358 Canola plasma membrane 63.0 35.53
CDX70286 Canola plasma membrane 63.0 35.53
CDY54604 Canola plasma membrane 61.67 35.31
CDY57881 Canola extracellular 14.33 34.4
CDY32098 Canola plasma membrane 61.67 34.07
CDX79614 Canola plasma membrane 60.67 33.03
CDY40448 Canola plasma membrane 62.33 31.59
CDY04011 Canola cytosol, peroxisome, plasma membrane 47.0 30.85
CDY00138 Canola cytosol, peroxisome, plasma membrane 46.33 30.42
CDX80885 Canola plasma membrane 49.67 28.38
Os02t0744600-01 Rice endoplasmic reticulum, extracellular 2.0 25.0
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 46.67 24.69
CDX75177 Canola cytosol 23.33 24.05
CDX84607 Canola mitochondrion 9.33 23.33
CDX85189 Canola plasma membrane 46.67 21.31
CDX86448 Canola plasma membrane 46.67 21.31
CDY20029 Canola plasma membrane 46.33 21.12
CDX76802 Canola plasma membrane 45.0 20.45
CDX83148 Canola plasma membrane 46.67 20.23
CDX92340 Canola plasma membrane 62.67 19.89
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 44.67 19.59
CDX72314 Canola plasma membrane 44.67 19.59
CDY13445 Canola plasma membrane 44.67 19.51
CDY08003 Canola cytosol, peroxisome, plasma membrane 44.0 18.99
CDX74051 Canola cytosol, peroxisome, plasma membrane 44.0 18.88
CDX68766 Canola plasma membrane 44.33 17.16
TraesCS2B01G370500.1 Wheat cytosol 7.33 15.6
CDY60854 Canola plasma membrane 44.33 15.2
CDY47235 Canola plasma membrane 14.0 12.88
CDY32100 Canola cytosol 0.67 11.76
CDY47368 Canola endoplasmic reticulum, extracellular 0.0 0.0
Protein Annotations
EnsemblPlants:CDY47369EnsemblPlantsGene:GSBRNA2T00087260001Gene3D:3.90.550.10GO:A0A078IDC4GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:Glyco_trans_2-likeInterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21
PFAM:PF13632ProteinID:CDY47369ProteinID:CDY47369.1SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EE11DE
UniProt:A0A078IDC4MapMan:21.2.3.1.1.1::::
Description
BnaCnng15060DBnaCnng15060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDC4]
Coordinates
chrLK032712:+:162174..168701
Molecular Weight (calculated)
35215.3 Da
IEP (calculated)
9.407
GRAVY (calculated)
0.243
Length
300 amino acids
Sequence
(BLAST)
001: MRHSYVKQCK YLVIFDADFQ PEPDYLQRTI PFLIHNPELA LVQARWKFVN ANTCLLTRMQ EMSLNYHFMA EQQSGSTRHA FFGFNGTAGV WRIAAMEEAG
101: GWKDRTTVED TDLAVRVGLL GWKFVFINDV EVKSELPSQF KAFRFQQHRW SCGPANLFRK MTMEIIHNQR VKIWKKFYVI YSFFFLRKII IHFFTFFFYC
201: VILPRSVFLP EVKIPNWATI YVPSIATLLS AIATPRSFYL VIFWPRYGFL ERVNLKEMVM GTYILCCACY DLFFGNTFLY LYLLMQAAAF LISGVGFVGT
Best Arabidopsis Sequence Match ( AT1G24070.1 )
(BLAST)
001: MTTFLKSLIF LQDSCLAFLS LMFHRGSSED AAEALKKLET SINGARISFD TTWTREFRSL FIVPLFKCLV AFCLIISLLV FIEGIYMNLV VLYVKVFERK
101: PEKVYRWEAM QEDIELGHET YPMVLVQIPM YNEKEVLQLS IGAACRLIWP LDRLIVQVLD DSTDQTIKEL VNTECAKWES KGVNIKCERR DNRNGYKAGA
201: LKEGMKHNYV KLCNYVVIFD ADFQPEPDYL QHSVPFLVHN PEVALVQARW RFMNANKCLM TRMQEMSLNY HFMAEQESGS TRHAFFSFNG TAGVWRMAAM
301: EEAGGWHDRT TVEDMDLAVR AGLLGWKFVF LNDLTVKSEL PSKFKAFRFQ QHRWSCGPAN LFRKMIMEII RNKRVTIWKK LYLVYSFFFL RKIIVHCFTF
401: IFYCVILPTS VFFPEVNIPA WSTFYIPSMI TLCIVIATPR SFYLVIFWIL FENVMSMHRT KGTFIGILER QRVNEWVVTE KLGDALKTKL LPRIGKPSNM
501: FLERVNSKEI MVGIYILCCA CYGLFFGNTL LYLYLFMQAV AFLISGVGFV GT
Arabidopsis Description
CSLA10Probable mannan synthase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR87]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.