Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 3
- extracellular 3
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32100 | Canola | cytosol | 6.9 | 23.53 |
| CDY01129 | Canola | plasma membrane | 77.59 | 8.36 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 74.14 | 8.01 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 60.34 | 7.9 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 58.62 | 7.67 |
| CDY09672 | Canola | golgi | 46.55 | 7.67 |
| CDX78675 | Canola | plasma membrane | 65.52 | 7.54 |
| Os02t0744650-00 | Rice | cytosol, mitochondrion, peroxisome, plasma membrane | 51.72 | 7.48 |
| CDY26505 | Canola | plasma membrane | 65.52 | 7.41 |
| CDX80885 | Canola | plasma membrane | 58.62 | 6.48 |
| CDY11268 | Canola | plasma membrane | 58.62 | 6.39 |
| CDY04707 | Canola | plasma membrane | 60.34 | 6.31 |
| CDY44151 | Canola | plasma membrane | 60.34 | 6.31 |
| CDY40295 | Canola | plasma membrane | 56.9 | 6.04 |
| CDY10358 | Canola | plasma membrane | 55.17 | 6.02 |
| CDX70286 | Canola | plasma membrane | 55.17 | 6.02 |
| CDX72181 | Canola | plasma membrane | 53.45 | 5.93 |
| CDY54604 | Canola | plasma membrane | 53.45 | 5.92 |
| CDX88785 | Canola | plasma membrane | 51.72 | 5.88 |
| CDX71011 | Canola | plasma membrane | 51.72 | 5.88 |
| CDY09164 | Canola | plasma membrane | 51.72 | 5.88 |
| CDY35710 | Canola | plasma membrane | 51.72 | 5.87 |
| CDY26949 | Canola | plasma membrane | 50.0 | 5.69 |
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 39.66 | 5.03 |
| TraesCS2B01G370500.1 | Wheat | cytosol | 12.07 | 4.96 |
| CDX90506 | Canola | plasma membrane | 46.55 | 4.88 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 37.93 | 4.81 |
| CDY32110 | Canola | mitochondrion | 36.21 | 4.77 |
| CDX79614 | Canola | plasma membrane | 44.83 | 4.72 |
| CDY32098 | Canola | plasma membrane | 43.1 | 4.6 |
| CDY40448 | Canola | plasma membrane | 43.1 | 4.22 |
| CDX72314 | Canola | plasma membrane | 41.38 | 3.51 |
| CDX86448 | Canola | plasma membrane | 39.66 | 3.5 |
| CDX85189 | Canola | plasma membrane | 39.66 | 3.5 |
| CDY20029 | Canola | plasma membrane | 39.66 | 3.5 |
| CDY13445 | Canola | plasma membrane | 41.38 | 3.49 |
| CDX76802 | Canola | plasma membrane | 39.66 | 3.48 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 39.66 | 3.36 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 32.76 | 3.35 |
| CDX92340 | Canola | plasma membrane | 51.72 | 3.17 |
| CDX68766 | Canola | plasma membrane | 41.38 | 3.1 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 34.48 | 2.88 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 34.48 | 2.86 |
| CDX83148 | Canola | plasma membrane | 32.76 | 2.75 |
| CDY60854 | Canola | plasma membrane | 41.38 | 2.74 |
| CDX84607 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX75177 | Canola | cytosol | 0.0 | 0.0 |
| CDY47235 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY47369 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY57881 | Canola | extracellular | 0.0 | 0.0 |
| CDY68733 | Canola | plasma membrane | 0.0 | 0.0 |
| Os02t0744600-01 | Rice | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY47368 | EnsemblPlantsGene:GSBRNA2T00087259001 | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | ProteinID:CDY47368 | ProteinID:CDY47368.1 |
| UniParc:UPI0004EECF91 | UniProt:A0A078IDV1 | MapMan:35.1 | : | : | : |
Description
BnaCnng15050DBnaCnng15050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDV1]
Coordinates
chrLK032712:+:161299..162117
Molecular Weight (calculated)
6698.2 Da
IEP (calculated)
4.820
GRAVY (calculated)
0.076
Length
58 amino acids
Sequence
(BLAST)
(BLAST)
1: MFSHMSFTIK YLNYLIGAAC RLMWPSDRLI VQVLDDSTDP DIMELISKEC GKWASKDI
001: MFLLLKPLLS LHDLSLNLLS VMFHGETLKA SVDGVGINMS TMWRETRNVF IVPLFKCIVV MCLIISLLVF VESVYMNLVV LYVKLFNRKP EKVYKWEAMQ
101: EDMELGHQNY PMVLVQIPMY NEREVFELSI GAACRLTWPS DRLIVQVLDD STDPAIMELV SMECTKWASK DININYERRE NRNGYKAGAL KHGMRHSYVK
201: QCQYLAIFDA DFQPEPDYLQ RAIPFLIHNP EVALVQARWR FVNANTCLMT RMQEMSLNYH FMAEQQSGST RHAFFGFNGT AGVWRMVAME EAGGWKDRTT
301: VEDMDLAVRV GLLGWKFIFV NDLEVKSELP SQFKAFRFQQ HRWSCGPANL IRKMTMEIIH NKVFLPFTIF HFQTHISHVP TTFLFGSSLA TILRGASF
101: EDMELGHQNY PMVLVQIPMY NEREVFELSI GAACRLTWPS DRLIVQVLDD STDPAIMELV SMECTKWASK DININYERRE NRNGYKAGAL KHGMRHSYVK
201: QCQYLAIFDA DFQPEPDYLQ RAIPFLIHNP EVALVQARWR FVNANTCLMT RMQEMSLNYH FMAEQQSGST RHAFFGFNGT AGVWRMVAME EAGGWKDRTT
301: VEDMDLAVRV GLLGWKFIFV NDLEVKSELP SQFKAFRFQQ HRWSCGPANL IRKMTMEIIH NKVFLPFTIF HFQTHISHVP TTFLFGSSLA TILRGASF
Arabidopsis Description
CSLA15Probable mannan synthase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0L2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.