Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70677 Canola cytosol, peroxisome, plasma membrane 92.55 92.55
Bra008638.1-P Field mustard plasma membrane 99.55 87.33
CDY26505 Canola plasma membrane 99.1 85.58
CDY47369 Canola plasma membrane 56.66 83.67
CDX78675 Canola plasma membrane 93.45 82.14
CDY68733 Canola plasma membrane 49.66 80.88
AT5G16190.4 Thale cress plasma membrane 91.42 75.42
CDY01129 Canola plasma membrane 81.72 67.29
CDY40295 Canola plasma membrane 81.26 65.93
CDY47368 Canola endoplasmic reticulum, extracellular 7.9 60.34
CDY09672 Canola golgi 46.73 58.81
CDX90506 Canola plasma membrane 73.36 58.77
CDY32110 Canola mitochondrion 55.98 56.36
CDY10358 Canola plasma membrane 67.27 56.02
CDX70286 Canola plasma membrane 67.27 56.02
CDY11268 Canola plasma membrane 67.27 56.02
CDY44151 Canola plasma membrane 69.98 55.86
CDY04707 Canola plasma membrane 69.75 55.68
CDX72181 Canola plasma membrane 65.46 55.45
CDY54604 Canola plasma membrane 64.79 54.77
CDY35710 Canola plasma membrane 59.82 51.86
CDX88785 Canola plasma membrane 59.59 51.76
CDX71011 Canola plasma membrane 59.59 51.76
CDY09164 Canola plasma membrane 59.59 51.76
CDY26949 Canola plasma membrane 59.37 51.57
CDY32098 Canola plasma membrane 63.21 51.57
CDX79614 Canola plasma membrane 61.17 49.18
CDX80885 Canola plasma membrane 57.34 48.38
CDY40448 Canola plasma membrane 63.43 47.47
CDX84607 Canola mitochondrion 12.19 45.0
CDY04011 Canola cytosol, peroxisome, plasma membrane 44.7 43.33
CDY00138 Canola cytosol, peroxisome, plasma membrane 44.02 42.67
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 44.92 35.1
CDY57881 Canola extracellular 9.03 32.0
CDX86448 Canola plasma membrane 45.37 30.59
CDX85189 Canola plasma membrane 45.37 30.59
CDY20029 Canola plasma membrane 45.15 30.4
CDX76802 Canola plasma membrane 44.7 30.0
CDY32100 Canola cytosol 1.13 29.41
CDX72314 Canola plasma membrane 45.37 29.39
CDY13445 Canola plasma membrane 44.92 28.97
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 44.7 28.95
CDX83148 Canola plasma membrane 44.92 28.76
CDX92340 Canola plasma membrane 59.59 27.94
CDY08003 Canola cytosol, peroxisome, plasma membrane 43.34 27.63
CDX74051 Canola cytosol, peroxisome, plasma membrane 43.34 27.47
CDX68766 Canola plasma membrane 45.15 25.81
CDX75177 Canola cytosol 16.7 25.43
CDY60854 Canola plasma membrane 45.15 22.86
CDY47235 Canola plasma membrane 12.87 17.48
Protein Annotations
EnsemblPlants:CDX69464EnsemblPlantsGene:GSBRNA2T00135448001Gene3D:3.90.550.10GO:A0A078BZU2InterPro:IPR029044InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641ProteinID:CDX69464ProteinID:CDX69464.1SUPFAM:SSF53448
TMHMM:TMhelixUniParc:UPI0004EE0033MapMan:21.2.3.1.1.1:::
Description
BnaA10g18130D
Coordinates
chrLK031790:+:357014..359655
Molecular Weight (calculated)
51378.0 Da
IEP (calculated)
8.457
GRAVY (calculated)
0.098
Length
443 amino acids
Sequence
(BLAST)
001: MQEDIEQGGQ NFPMVLVQIP MYNEREVFQL SIGAACRLIW PLDRLIVQVL DDSTDPTIME MVSMECAQWA SKGINIKCER RDNRNGYKAG ALKQGMRHSY
101: VKQCNYIAIF DADFQPEPDY LQRTVPFLIH NSELALVQAR WKFVNASKCL MTRMQEMSLN YHFMAEQESG STRHAFFGFN GTAGVWRLAA MEEAGGWKDR
201: TTVEDMDLAV RVGLHGWKFV FVNDITVKSE LPSQFKAFRF QQHRWSCGPA NLFRKMTMEI IHNKRVMIWK KLYVIYSFFF VRKIIVHFFT FFFYCVILPT
301: SVFFSEVNIP TWSTIYLPFM ITLFNAIATP RSFYLVVFWV LFENVMAMHR TKGTFIGLLE GGRVNEWVVT EKLGDALETK LLPQVKKPRN GILERVNTKE
401: MMVGIYILCC ACYDFAYGNT LLYIYLSMQA LAFIICGFGF VGT
Best Arabidopsis Sequence Match ( AT5G16190.3 )
(BLAST)
001: MKTMWWRDMR SLLIVPMFKC LVAICLVISL LVFVESLYMN IVVIYVKLCK RKPEKIYKWE AMQEDLELGN QNFPMVLVQI PMYNEREVFK LSIGAACRLI
101: WPLDRLIVQV LDDSTDPTIM EMVSTECGKW ATKGINIKCE RRDNRNGYKA GALKQGMRHS YVKTCTYIAI FDADFQPEPD YLERTVPFLI HNPELALVQA
201: RWKFVNAKKC LMTRMQEMSL NYHFTAEQES GSTRHAFFGF NGTAGVWRLA AMEEAGGWKD RTTVEDMDLA VRVGLHGWKF VFVNDVSVKS ELPSQFKAFR
301: FQQHRWSCGP ANLFRKMTME IIRNKRVTIW KKLYVIYSFF FVRKIIVHFF TFFFYCFILP TSVFFPEVNI PTWSTVYFPF MITLFNAIAT PRSFYLVIFW
401: VLFENVMAMH RTKGTFIGLL EGGRVNEWVV TEKLGDALET KLLPQVRKPR NGFLERINSK EMMVGIYILC CASYNLVFGK TVLYIYLYMQ ALAFIIAGIG
501: FIGT
Arabidopsis Description
ATCSLA11cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.