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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68733 Canola plasma membrane 48.35 97.06
Bra012416.1-P Field mustard plasma membrane 96.34 96.34
AT1G24070.1 Thale cress plasma membrane 87.91 86.96
CDX69464 Canola cytosol, peroxisome, plasma membrane 65.93 81.26
CDX78675 Canola plasma membrane 74.54 80.75
CDX70677 Canola cytosol, peroxisome, plasma membrane 65.38 80.59
CDY26505 Canola plasma membrane 74.18 78.95
CDY47369 Canola plasma membrane 42.86 78.0
CDY01129 Canola plasma membrane 73.63 74.72
CDY09672 Canola golgi 43.77 67.9
CDX90506 Canola plasma membrane 67.22 66.37
CDY44151 Canola plasma membrane 62.45 61.44
CDY10358 Canola plasma membrane 59.71 61.28
CDX70286 Canola plasma membrane 59.71 61.28
CDY04707 Canola plasma membrane 62.27 61.26
CDY11268 Canola plasma membrane 59.52 61.09
CDX72181 Canola plasma membrane 56.41 58.89
CDY54604 Canola plasma membrane 56.23 58.59
CDY32098 Canola plasma membrane 57.69 58.01
CDY47368 Canola endoplasmic reticulum, extracellular 6.04 56.9
CDX79614 Canola plasma membrane 57.14 56.62
CDY35710 Canola plasma membrane 52.93 56.56
CDY09164 Canola plasma membrane 52.75 56.47
CDY32110 Canola mitochondrion 45.42 56.36
CDY26949 Canola plasma membrane 52.56 56.27
CDX71011 Canola plasma membrane 52.2 55.88
CDX88785 Canola plasma membrane 52.2 55.88
CDX80885 Canola plasma membrane 51.47 53.52
CDY40448 Canola plasma membrane 57.88 53.38
CDY32100 Canola cytosol 1.47 47.06
CDX84607 Canola mitochondrion 9.34 42.5
CDY04011 Canola cytosol, peroxisome, plasma membrane 35.53 42.45
CDY00138 Canola cytosol, peroxisome, plasma membrane 35.16 42.01
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 38.28 36.86
CDY20029 Canola plasma membrane 39.74 32.98
CDX72314 Canola plasma membrane 41.21 32.89
CDX76802 Canola plasma membrane 39.74 32.88
CDX85189 Canola plasma membrane 39.56 32.88
CDX86448 Canola plasma membrane 39.56 32.88
CDY13445 Canola plasma membrane 40.66 32.31
CDY57881 Canola extracellular 7.33 32.0
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 39.93 31.87
CDX83148 Canola plasma membrane 39.19 30.92
CDX92340 Canola plasma membrane 52.56 30.37
CDY08003 Canola cytosol, peroxisome, plasma membrane 38.28 30.07
CDX74051 Canola cytosol, peroxisome, plasma membrane 38.28 29.9
CDX68766 Canola plasma membrane 41.39 29.16
CDY60854 Canola plasma membrane 41.39 25.83
CDX75177 Canola cytosol 13.37 25.09
CDY47235 Canola plasma membrane 10.99 18.4
Protein Annotations
EnsemblPlants:CDY40295EnsemblPlantsGene:GSBRNA2T00069470001Gene3D:3.90.550.10GO:A0A078HP05GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
ProteinID:CDY40295ProteinID:CDY40295.1SEG:segSUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EED0AC
UniProt:A0A078HP05MapMan:21.2.3.1.1.1::::
Description
BnaA07g09050DBnaA07g09050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP05]
Coordinates
chrLK032467:+:300937..304236
Molecular Weight (calculated)
63033.8 Da
IEP (calculated)
9.141
GRAVY (calculated)
0.192
Length
546 amino acids
Sequence
(BLAST)
001: MALFLKPLII FLHDSWLALL SLLNYGWSSE EAAGVPKKLQ ASIKTTWGRQ LRSSLMVPLF KCLVAFCLII SLLVFIEGVY MNLVVLYVKL FKRKPEKVYK
101: WEPMQEDIEL GDESYPMVLV QIPMYNEKEV LKLSIGAACR LTWPLDRLIV QVLDDSTDET IKELVNTECA KWENKGVNIK CERRDNRNGY KAGALKQGMK
201: HNYVKLCNYV AIFDADFQPE PDYLQRSVPF LVHNPNVALV QARWRFMNAN KCLMTRIQEM SLNYHFMAEQ ESGSTRHAFF SFNGTAGVWR MAAMEEAGGW
301: NDRTTVEDMD LAVRAGLLGW KFVFLHDLTV KSELPSKFKA FRFQQHRWSC GPANLFRKMI MEIIRNKRVT LWKKLYLIYS FFFLRKILVH FFTFFFYCVV
401: LPTSVFFPEV NIPAWSTFFI PSLITLSIVI ATPRSFYLVI FWVLFENVMS MHRTKGTFIG ILEGGRVNEW VVTEKLGDAL KTKLLPQIGK PRNGCFESIN
501: SKEIMMGIYI LCCACYGLFS GDTLLYLYLF MQAVAFLVSG VGFVGT
Best Arabidopsis Sequence Match ( AT1G24070.1 )
(BLAST)
001: MTTFLKSLIF LQDSCLAFLS LMFHRGSSED AAEALKKLET SINGARISFD TTWTREFRSL FIVPLFKCLV AFCLIISLLV FIEGIYMNLV VLYVKVFERK
101: PEKVYRWEAM QEDIELGHET YPMVLVQIPM YNEKEVLQLS IGAACRLIWP LDRLIVQVLD DSTDQTIKEL VNTECAKWES KGVNIKCERR DNRNGYKAGA
201: LKEGMKHNYV KLCNYVVIFD ADFQPEPDYL QHSVPFLVHN PEVALVQARW RFMNANKCLM TRMQEMSLNY HFMAEQESGS TRHAFFSFNG TAGVWRMAAM
301: EEAGGWHDRT TVEDMDLAVR AGLLGWKFVF LNDLTVKSEL PSKFKAFRFQ QHRWSCGPAN LFRKMIMEII RNKRVTIWKK LYLVYSFFFL RKIIVHCFTF
401: IFYCVILPTS VFFPEVNIPA WSTFYIPSMI TLCIVIATPR SFYLVIFWIL FENVMSMHRT KGTFIGILER QRVNEWVVTE KLGDALKTKL LPRIGKPSNM
501: FLERVNSKEI MVGIYILCCA CYGLFFGNTL LYLYLFMQAV AFLISGVGFV GT
Arabidopsis Description
CSLA10Probable mannan synthase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR87]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.