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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, plasma membrane
BaCelLo:cytosol
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007838.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 97.42 97.42
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 97.27 93.86
AT2G24630.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 92.42 88.41
CDY13445 Canola plasma membrane 86.97 83.55
CDX72314 Canola plasma membrane 86.36 83.33
CDY04011 Canola cytosol, peroxisome, plasma membrane 54.24 78.34
CDY00138 Canola cytosol, peroxisome, plasma membrane 54.09 78.12
Os08t0253800-01 Rice cytosol, peroxisome, plasma membrane 56.21 77.45
VIT_04s0069g00780.t01 Wine grape plasma membrane 79.55 75.65
VIT_09s0018g01950.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 77.88 74.17
KRH61950 Soybean plasma membrane 77.73 74.03
CDX68766 Canola plasma membrane 86.52 73.68
KRH52609 Soybean plasma membrane 77.27 73.59
PGSC0003DMT400024646 Potato golgi, peroxisome, plasma membrane 76.97 73.2
Solyc08g006310.2.1 Tomato golgi, peroxisome, plasma membrane 76.52 72.77
KRH16165 Soybean plasma membrane 75.45 71.86
KRH04930 Soybean plasma membrane 74.85 71.28
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 60.61 70.55
CDY57881 Canola extracellular 13.33 70.4
CDY20029 Canola plasma membrane 66.82 67.02
CDX85189 Canola plasma membrane 66.52 66.82
CDX86448 Canola plasma membrane 66.36 66.67
HORVU3Hr1G000340.2 Barley plasma membrane 64.85 66.25
CDY60854 Canola plasma membrane 86.97 65.6
CDX83148 Canola plasma membrane 66.82 63.73
TraesCS3B01G000600.1 Wheat cytosol, peroxisome, plasma membrane 71.21 62.58
TraesCSU01G038900.1 Wheat cytosol, peroxisome, plasma membrane 71.06 62.53
TraesCS3D01G010500.1 Wheat cytosol, peroxisome, plasma membrane 71.06 61.87
Zm00001d049336_P001 Maize plasma membrane 71.52 61.78
Zm00001d024178_P002 Maize cytosol, peroxisome, plasma membrane 70.45 61.43
KXG24822 Sorghum peroxisome 70.45 61.18
CDY08003 Canola cytosol, peroxisome, plasma membrane 62.27 59.14
CDX74051 Canola cytosol, peroxisome, plasma membrane 62.12 58.66
CDY47235 Canola plasma membrane 25.91 52.45
KRH57821 Soybean plasma membrane 18.64 51.04
CDX75177 Canola cytosol 21.52 48.8
CDY09672 Canola golgi 24.24 45.45
CDY47369 Canola plasma membrane 20.45 45.0
CDX69464 Canola cytosol, peroxisome, plasma membrane 30.0 44.7
CDX70677 Canola cytosol, peroxisome, plasma membrane 29.85 44.47
CDY10358 Canola plasma membrane 35.76 44.36
CDY11268 Canola plasma membrane 35.76 44.36
CDX70286 Canola plasma membrane 35.61 44.17
CDX79614 Canola plasma membrane 35.15 42.11
CDY32110 Canola mitochondrion 27.88 41.82
CDY26505 Canola plasma membrane 32.42 41.72
CDX78675 Canola plasma membrane 31.82 41.67
CDY35710 Canola plasma membrane 31.97 41.29
CDY32100 Canola cytosol 1.06 41.18
CDY32098 Canola plasma membrane 33.79 41.07
CDX88785 Canola plasma membrane 31.67 40.98
CDY09164 Canola plasma membrane 31.52 40.78
CDY26949 Canola plasma membrane 31.52 40.78
CDX71011 Canola plasma membrane 31.52 40.78
CDY01129 Canola plasma membrane 33.03 40.52
CDY04707 Canola plasma membrane 33.79 40.18
CDY44151 Canola plasma membrane 33.79 40.18
CDY54604 Canola plasma membrane 31.82 40.08
CDX72181 Canola plasma membrane 31.52 39.77
CDY40295 Canola plasma membrane 32.88 39.74
CDY47368 Canola endoplasmic reticulum, extracellular 3.48 39.66
CDX90506 Canola plasma membrane 31.97 38.16
CDY40448 Canola plasma membrane 33.94 37.84
CDY68733 Canola plasma membrane 15.3 37.13
CDX80885 Canola plasma membrane 29.09 36.57
CDX84607 Canola mitochondrion 5.0 27.5
CDX92340 Canola plasma membrane 31.52 22.01
Protein Annotations
EnsemblPlants:CDX76802EnsemblPlantsGene:GSBRNA2T00127301001Gene3D:3.90.550.10GO:A0A078CJ74InterPro:IPR029044InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044PANTHER:PTHR32044:SF7PFAM:PF13641ProteinID:CDX76802ProteinID:CDX76802.1SEG:seg
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EDF68EMapMan:21.2.1.1.1::
Description
BnaC08g33880D
Coordinates
chrLK031808:+:1173881..1176524
Molecular Weight (calculated)
75559.6 Da
IEP (calculated)
8.341
GRAVY (calculated)
0.131
Length
660 amino acids
Sequence
(BLAST)
001: MENPNYSIVE VDEPDGAFTP MERTRGKNAK QVTWVLLLQA HKAVGCLAWL ATASWSLLGS VKRRLCFNHR LGSERLGRDR WLFSAIKLFL AASLSVLVFE
101: LIAYYKGWHY FKNIPTSTLE IQSLFHLLYV GWLSLRADYI APPVKALSKL CIVLFLVQSV DRLILCLGCF WIKYKKIKPR IDEEPFRNDD VEGSGTEYPM
201: VLVQIPMCNE KEVYEQSISA VCQLDWPKDR MLIQVLDDSD DGSIQELIRA EVTKWSQKGV NIIYRHRLVR TGYKAGNLKS AMSCDYVKAY EFVAIFDADF
301: QPNSDFLKLT VPHFKEKPEL GLVQARWAFV NKDENLLTRL QNINLCFHFE VEQQVNGVFL NFFGFNGTAG VWRIKALEES GGWLERTTVE DMDIAVRAHL
401: HGWKFIYLND VKVLCEVPES YEAYKKQQHR WHSGPMQLFR LCLGAILTSK IAMWKKANLI LLFFLLRKLI LPFYSFTLFC VILPITMFVP EAELPVWVIC
501: YVPIFMSLLN VLPAPKSFPF IVPYLLFENT MSVTKFNAMV SGLFQLGSSY EWIVTKKAGR SSESDLLGLT DKSMPPNQMV RGVSDSELLE IGQAEEQKKQ
601: TVAVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
Best Arabidopsis Sequence Match ( AT2G24630.2 )
(BLAST)
001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
Arabidopsis Description
CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.