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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69464 Canola cytosol, peroxisome, plasma membrane 85.58 99.1
CDX78675 Canola plasma membrane 91.23 92.86
CDX70677 Canola cytosol, peroxisome, plasma membrane 79.92 92.55
AT5G16190.4 Thale cress plasma membrane 88.69 84.73
CDY47369 Canola plasma membrane 48.93 83.67
CDY68733 Canola plasma membrane 43.08 81.25
CDY01129 Canola plasma membrane 79.34 75.65
CDY40295 Canola plasma membrane 78.95 74.18
CDY09672 Canola golgi 47.76 69.6
CDX90506 Canola plasma membrane 70.76 65.64
CDY47368 Canola endoplasmic reticulum, extracellular 7.41 65.52
CDX70286 Canola plasma membrane 64.33 62.03
CDY11268 Canola plasma membrane 64.33 62.03
CDY10358 Canola plasma membrane 64.33 62.03
CDY44151 Canola plasma membrane 66.47 61.44
CDY04707 Canola plasma membrane 66.08 61.08
CDX72181 Canola plasma membrane 61.79 60.61
CDY54604 Canola plasma membrane 61.4 60.11
CDY32098 Canola plasma membrane 61.21 57.83
CDY09164 Canola plasma membrane 56.53 56.86
CDY32110 Canola mitochondrion 48.73 56.82
CDY35710 Canola plasma membrane 56.53 56.75
CDX88785 Canola plasma membrane 56.14 56.47
CDY26949 Canola plasma membrane 56.14 56.47
CDX71011 Canola plasma membrane 55.95 56.27
CDX79614 Canola plasma membrane 59.06 54.99
CDX80885 Canola plasma membrane 55.75 54.48
CDY40448 Canola plasma membrane 61.4 53.21
CDX84607 Canola mitochondrion 10.33 44.17
CDY04011 Canola cytosol, peroxisome, plasma membrane 38.6 43.33
CDY00138 Canola cytosol, peroxisome, plasma membrane 38.01 42.67
CDY32100 Canola cytosol 1.36 41.18
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 40.74 36.86
CDY20029 Canola plasma membrane 42.3 32.98
CDY57881 Canola extracellular 7.99 32.8
CDX86448 Canola plasma membrane 41.91 32.72
CDX85189 Canola plasma membrane 41.91 32.72
CDX76802 Canola plasma membrane 41.72 32.42
CDX72314 Canola plasma membrane 42.11 31.58
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 41.72 31.29
CDY13445 Canola plasma membrane 41.52 31.0
CDX92340 Canola plasma membrane 56.34 30.58
CDX83148 Canola plasma membrane 40.55 30.06
CDY08003 Canola cytosol, peroxisome, plasma membrane 40.16 29.64
CDX74051 Canola cytosol, peroxisome, plasma membrane 40.16 29.47
CDX68766 Canola plasma membrane 41.91 27.74
CDX75177 Canola cytosol 14.43 25.43
CDY60854 Canola plasma membrane 41.91 24.57
CDY47235 Canola plasma membrane 11.11 17.48
Protein Annotations
EnsemblPlants:CDY26505EnsemblPlantsGene:GSBRNA2T00035321001Gene3D:3.90.550.10GO:A0A078GJ38GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044PANTHER:PTHR32044:SF21PFAM:PF13641
ProteinID:CDY26505ProteinID:CDY26505.1SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EE8C78UniProt:A0A078GJ38
MapMan:21.2.3.1.1.1:::::
Description
BnaC09g41630DBnaC09g41630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJ38]
Coordinates
chrLK032190:-:526904..529817
Molecular Weight (calculated)
59740.8 Da
IEP (calculated)
8.598
GRAVY (calculated)
0.159
Length
513 amino acids
Sequence
(BLAST)
001: MCEELYSSME TMWLLRQTRS LLIVPVFKCL VDICLVISLL VFVESVYMNI VVVYVKLLKR KPEKTYKWEA MQEDIEQGGQ NFPMVLVQIP MYNEREVFQL
101: SIGAACRLIW PLDRLIVQVL DDSTDPTIME MVSMECAQWA SKGINIKCER RDNRNGYKAG ALKQGMRHSY VKQCNYIAIF DADFQPERDY LQRTVPFLIH
201: NPELALVQAR WKFVNASKCL MTRMQEMSLN YHFMAEQESG STRHAFFGFN GTAGVWRLPA MEEAGGWKDR TTVEDMDLAV RVGLHGWKFV FVNDITVKSE
301: LPSQFKAFRF QQHRWSCGPA NLFRKMTMEI IHNKRVMIWK KLYVIYSFFF VRKIIVHFFT FFFYCVILPT SVFFSEVNIP TWSTIYLPFM ITLFNAIATP
401: RSFYLVVFWV LFENVMAMHR TKGTFIGLLE GGRVNEWVVT EKLGDALETK LLPQVKKPRN GILERVNTKE MMVGIYILCC ACYDFAYGNT LLYIYLSMQA
501: LAFIICGVGF VGT
Best Arabidopsis Sequence Match ( AT5G16190.3 )
(BLAST)
001: MKTMWWRDMR SLLIVPMFKC LVAICLVISL LVFVESLYMN IVVIYVKLCK RKPEKIYKWE AMQEDLELGN QNFPMVLVQI PMYNEREVFK LSIGAACRLI
101: WPLDRLIVQV LDDSTDPTIM EMVSTECGKW ATKGINIKCE RRDNRNGYKA GALKQGMRHS YVKTCTYIAI FDADFQPEPD YLERTVPFLI HNPELALVQA
201: RWKFVNAKKC LMTRMQEMSL NYHFTAEQES GSTRHAFFGF NGTAGVWRLA AMEEAGGWKD RTTVEDMDLA VRVGLHGWKF VFVNDVSVKS ELPSQFKAFR
301: FQQHRWSCGP ANLFRKMTME IIRNKRVTIW KKLYVIYSFF FVRKIIVHFF TFFFYCFILP TSVFFPEVNI PTWSTVYFPF MITLFNAIAT PRSFYLVIFW
401: VLFENVMAMH RTKGTFIGLL EGGRVNEWVV TEKLGDALET KLLPQVRKPR NGFLERINSK EMMVGIYILC CASYNLVFGK TVLYIYLYMQ ALAFIIAGIG
501: FIGT
Arabidopsis Description
ATCSLA11cellulose synthase like A11 [Source:TAIR;Acc:AT5G16190]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.