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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26949 Canola plasma membrane 53.55 99.22
CDY09164 Canola plasma membrane 53.33 98.82
CDY35710 Canola plasma membrane 53.12 98.24
CDX88785 Canola plasma membrane 52.91 98.04
CDX71011 Canola plasma membrane 52.8 97.84
Bra002426.1-P Field mustard plasma membrane 96.93 94.53
AT5G22740.1 Thale cress plasma membrane 52.28 92.51
KRH30518 Soybean endoplasmic reticulum 44.76 78.04
KRH25159 Soybean endoplasmic reticulum 44.34 77.16
KRH22736 Soybean plasma membrane 43.49 77.11
VIT_06s0061g01230.t01 Wine grape plasma membrane 42.43 75.23
Solyc11g066820.1.1 Tomato plasma membrane 40.85 73.66
PGSC0003DMT400068221 Potato plasma membrane 40.63 73.28
Solyc06g074630.2.1 Tomato plasma membrane 41.06 72.8
PGSC0003DMT400018425 Potato plasma membrane 41.06 72.8
TraesCS6A01G169200.1 Wheat plasma membrane 38.1 69.5
TraesCS6B01G197200.1 Wheat plasma membrane 37.88 69.11
HORVU6Hr1G034630.10 Barley plasma membrane 37.88 69.11
TraesCS6D01G158600.1 Wheat plasma membrane 37.88 69.11
CDY10358 Canola plasma membrane 38.84 68.98
CDX70286 Canola plasma membrane 38.73 68.8
CDY11268 Canola plasma membrane 38.62 68.61
Os02t0192500-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.78 68.52
EES06436 Sorghum plasma membrane 37.04 67.18
CDY47369 Canola plasma membrane 19.89 62.67
Zm00001d053696_P003 Maize plasma membrane 36.83 61.27
CDY09672 Canola golgi 22.54 60.51
CDX69464 Canola cytosol, peroxisome, plasma membrane 27.94 59.59
CDX70677 Canola cytosol, peroxisome, plasma membrane 27.51 58.69
CDX78675 Canola plasma membrane 30.58 57.34
CDX80885 Canola plasma membrane 31.64 56.95
CDY26505 Canola plasma membrane 30.58 56.34
CDY44151 Canola plasma membrane 32.28 54.95
CDY04707 Canola plasma membrane 31.96 54.41
CDY01129 Canola plasma membrane 30.9 54.28
CDX72181 Canola plasma membrane 29.52 53.35
CDY54604 Canola plasma membrane 29.52 53.24
CDX79614 Canola plasma membrane 31.01 53.18
CDY32098 Canola plasma membrane 30.26 52.67
CDY68733 Canola plasma membrane 15.13 52.57
CDY40295 Canola plasma membrane 30.37 52.56
CDY32110 Canola mitochondrion 24.34 52.27
CDY47368 Canola endoplasmic reticulum, extracellular 3.17 51.72
CDX90506 Canola plasma membrane 29.52 50.45
CDY40448 Canola plasma membrane 30.48 48.65
CDY32100 Canola cytosol 0.85 47.06
CDY04011 Canola cytosol, peroxisome, plasma membrane 20.85 43.11
CDY00138 Canola cytosol, peroxisome, plasma membrane 20.32 42.01
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 22.01 36.68
CDY57881 Canola extracellular 4.44 33.6
CDX86448 Canola plasma membrane 22.86 32.88
CDX85189 Canola plasma membrane 22.86 32.88
CDY20029 Canola plasma membrane 22.43 32.22
CDX84607 Canola mitochondrion 4.02 31.67
CDX76802 Canola plasma membrane 22.01 31.52
CDX72314 Canola plasma membrane 22.22 30.7
CDY13445 Canola plasma membrane 22.22 30.57
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 22.12 30.56
CDX83148 Canola plasma membrane 22.22 30.35
CDY08003 Canola cytosol, peroxisome, plasma membrane 22.12 30.07
CDX74051 Canola cytosol, peroxisome, plasma membrane 22.01 29.76
CDX68766 Canola plasma membrane 22.33 27.23
CDX75177 Canola cytosol 7.62 24.74
CDY60854 Canola plasma membrane 22.33 24.11
CDY47235 Canola plasma membrane 5.4 15.64
Protein Annotations
MapMan:21.2.3.1.1.1Gene3D:3.80.10.10Gene3D:3.90.550.10GO:A0A078DSN6EnsemblPlants:CDX92340ProteinID:CDX92340
ProteinID:CDX92340.1InterPro:FBDGO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0097502EnsemblPlantsGene:GSBRNA2T00154073001InterPro:Glyco_trans_2-likeInterPro:IPR029044InterPro:IPR032675
InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_2InterPro:Nucleotide-diphossugar_transPFAM:PF07723PFAM:PF08387PFAM:PF13632
PANTHER:PTHR32044PANTHER:PTHR32044:SF17SMART:SM00579SUPFAM:SSF52047SUPFAM:SSF53448TMHMM:TMhelix
UniParc:UPI0004EEF5A6:::::
Description
BnaA10g13790D
Coordinates
chrLK031872:+:53292..60594
Molecular Weight (calculated)
108846.0 Da
IEP (calculated)
7.366
GRAVY (calculated)
0.083
Length
945 amino acids
Sequence
(BLAST)
001: MDGVTPKFVL PETFDGVKME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSLMLLCERV YMGIVIVLVK LFWKKPHKRY KFEPIQDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAS GLSWPSDRLV IQVLDDSTDP TVKQMVEMEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLVHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIIRNKKV RFWKKVYVIY SFFFVRKVIA HWVTFCFYCA VLPLTILVPE VKVPIWGSVY
401: IPSIITVLNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GNTKGLKKFP RIFKLPDRLN TLELGFAAFL FVCGCYDYAH GKNNYFIYLF LQTMSFFISG
501: LGWIGTYVPS VTMQTTCRAN LAMSERGTIR RSGEDWISFL PDPLLCQILS DLPTKNVVIT SVLFLDFSQE SCLHKLTLSF TRQDDDDPSL LASWIETAVL
601: RKIQHLEVDC RMSFMCETTS LSLYLCETLV SLRLYFVALP SFESLSLPNL KVMHMEENLY ADDEILEKLV SSCPVLESLT VVRNVDETVK VLRVWSKTLN
701: SLKLVLDSSK SWYNDDSDDW EVLIDAPRRK YLSLEDDQSV SFVISNVASS AKVEIDVSFN VNDIWDMDES VERFSAVGKM LNGLSSARDM TISGTTLKII
801: CHYMSFEPVP CFPNMIRLQT KLYMTDMLPN FLESFPNLQS LVLKLKGVRY SDTMWFSFVP KCLQTSLEYF EMTRPNCGAG ITKLVKYLLE NSVVLKKFTL
901: RLECEGKEQE SDVVKELMRF RRCSSACVIK VVRLEDDVCI FEHPY
Best Arabidopsis Sequence Match ( AT5G22740.1 )
(BLAST)
001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS
Arabidopsis Description
CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.