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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000635.1-P Field mustard plasma membrane 99.42 99.42
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 80.78 98.59
AT4G07960.1 Thale cress plasma membrane 91.33 90.41
Os01t0766900-01 Rice golgi, plasma membrane 20.66 83.14
GSMUA_Achr6P30200_001 Banana cytosol 70.23 78.77
VIT_18s0001g08580.t01 Wine grape cytosol, peroxisome, plasma membrane 79.19 78.4
KRH15467 Soybean plasma membrane 79.19 78.4
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 70.38 78.3
GSMUA_Achr7P00750_001 Banana plasma membrane 70.38 78.04
CDY04011 Canola cytosol, peroxisome, plasma membrane 51.16 77.46
KRH61452 Soybean plasma membrane 79.19 77.4
KRH52142 Soybean plasma membrane 78.9 77.34
CDY00138 Canola cytosol, peroxisome, plasma membrane 51.01 77.24
PGSC0003DMT400030125 Potato plasma membrane 74.28 77.18
GSMUA_Achr5P01920_001 Banana plasma membrane 71.39 76.71
GSMUA_Achr4P32270_001 Banana plasma membrane 70.38 76.33
Solyc12g088240.1.1 Tomato cytosol, peroxisome, plasma membrane 75.72 76.16
Os03t0770800-01 Rice plasma membrane 63.58 73.83
PGSC0003DMT400012668 Potato plasma membrane 78.47 73.18
Solyc04g077470.2.1 Tomato plasma membrane 78.47 73.18
GSMUA_Achr4P23120_001 Banana cytosol, peroxisome, plasma membrane 74.42 73.15
EER90820 Sorghum plasma membrane 73.12 73.12
Os05t0510800-01 Rice plasma membrane 72.4 72.82
KXG33450 Sorghum mitochondrion, peroxisome, plasma membrane 72.25 72.57
Zm00001d012666_P003 Maize plasma membrane 71.53 71.95
KXG22328 Sorghum plasma membrane 72.4 71.88
TraesCS5A01G405700.1 Wheat mitochondrion 72.98 71.83
Zm00001d034205_P001 Maize plasma membrane 73.41 71.65
Zm00001d013168_P001 Maize plasma membrane 70.52 71.14
TraesCS5B01G410400.1 Wheat mitochondrion 73.12 71.07
Zm00001d043336_P001 Maize plasma membrane 69.51 70.42
HORVU3Hr1G074570.1 Barley plasma membrane 70.81 70.4
Zm00001d038676_P001 Maize plasma membrane 70.95 69.94
TraesCS3B01G337100.1 Wheat plasma membrane 70.23 69.63
TraesCS3A01G299500.1 Wheat plasma membrane 70.81 69.6
HORVU1Hr1G077230.2 Barley plasma membrane 69.8 69.1
TraesCS1B01G345400.1 Wheat plasma membrane 70.09 69.09
TraesCS3D01G302300.1 Wheat plasma membrane 70.23 69.03
TraesCS5D01G415700.1 Wheat mitochondrion 73.41 69.02
TraesCS1A01G331800.1 Wheat plasma membrane 69.94 68.95
TraesCS1D01G334400.1 Wheat plasma membrane 69.8 68.8
Os07t0124750-00 Rice plasma membrane 70.95 68.67
HORVU1Hr1G067470.1 Barley plasma membrane 67.63 68.12
TraesCS1A01G312600.1 Wheat mitochondrion, plasma membrane 67.92 68.12
TraesCS1D01G312700.1 Wheat plasma membrane 67.92 68.12
CDX72314 Canola plasma membrane 67.05 67.84
TraesCS1B01G324200.1 Wheat mitochondrion 67.49 67.68
CDY13445 Canola plasma membrane 66.47 66.96
KXG34323 Sorghum plasma membrane 65.9 66.86
CDX76802 Canola plasma membrane 63.73 66.82
CDY34762 Canola endoplasmic reticulum, peroxisome, plasma membrane 66.04 66.81
CDX85189 Canola plasma membrane 62.14 65.45
CDX86448 Canola plasma membrane 61.99 65.3
CDY20029 Canola plasma membrane 61.99 65.2
CDY57881 Canola extracellular 11.42 63.2
CDY08003 Canola cytosol, peroxisome, plasma membrane 61.13 60.86
CDX74051 Canola cytosol, peroxisome, plasma membrane 60.98 60.37
CDX68766 Canola plasma membrane 67.49 60.26
CDX75177 Canola cytosol 24.28 57.73
CDY47235 Canola plasma membrane 25.29 53.68
CDY60854 Canola plasma membrane 67.63 53.49
CDY47369 Canola plasma membrane 20.23 46.67
CDY09672 Canola golgi 23.41 46.02
CDX70677 Canola cytosol, peroxisome, plasma membrane 28.9 45.15
CDX69464 Canola cytosol, peroxisome, plasma membrane 28.76 44.92
CDY11268 Canola plasma membrane 32.51 42.29
CDX70286 Canola plasma membrane 32.37 42.11
CDX78675 Canola plasma membrane 30.64 42.06
CDY10358 Canola plasma membrane 32.23 41.92
CDY35710 Canola plasma membrane 30.64 41.49
CDY09164 Canola plasma membrane 30.49 41.37
CDY32110 Canola mitochondrion 26.3 41.36
CDX79614 Canola plasma membrane 32.66 41.02
CDX71011 Canola plasma membrane 30.2 40.98
CDY04707 Canola plasma membrane 32.8 40.9
CDX88785 Canola plasma membrane 30.06 40.78
CDY26949 Canola plasma membrane 30.06 40.78
CDY44151 Canola plasma membrane 32.66 40.72
CDY01129 Canola plasma membrane 31.65 40.71
CDY26505 Canola plasma membrane 30.06 40.55
CDY54604 Canola plasma membrane 30.49 40.27
CDX72181 Canola plasma membrane 30.35 40.15
CDY32098 Canola plasma membrane 31.36 39.96
CDX90506 Canola plasma membrane 31.36 39.24
CDY40295 Canola plasma membrane 30.92 39.19
CDY68733 Canola plasma membrane 15.03 38.24
CDY40448 Canola plasma membrane 31.36 36.66
CDX80885 Canola plasma membrane 27.02 35.62
CDY32100 Canola cytosol 0.87 35.29
CDY47368 Canola endoplasmic reticulum, extracellular 2.75 32.76
CDX84607 Canola mitochondrion 5.06 29.17
CDX92340 Canola plasma membrane 30.35 22.22
Protein Annotations
EnsemblPlants:CDX83148EnsemblPlantsGene:GSBRNA2T00138676001Gene3D:3.90.550.10GO:A0A078D7C7InterPro:IPR029044InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044PANTHER:PTHR32044:SF45PFAM:PF13641ProteinID:CDX83148ProteinID:CDX83148.1SEG:seg
SUPFAM:SSF53448TMHMM:TMhelixUniParc:UPI0004EEA882MapMan:21.2.1.1.1::
Description
BnaA03g23580D
Coordinates
chrLK031832:+:95768..98274
Molecular Weight (calculated)
78947.6 Da
IEP (calculated)
9.448
GRAVY (calculated)
0.002
Length
692 amino acids
Sequence
(BLAST)
001: MAPKFEWWAK GNNRKGTPVV VKMENPNNWS MVELESPSEQ DFLVEGRREK SRNKNARQLT WVLLLKAHRA AGCLTSLGSA LIALGTAVRR RIAAGRTDTD
101: ISSSSSPAIA KSKPRFLYSC LKVFLLLSLM LLAFETAAYF KGSHFETPKL QLPYGFFDWV YTHWVLLRVG YLAPPLQFLA NACIVLFLIQ SLDRLILCLG
201: CFWIRFNKIK PVPKTVISDL ETGENGCFLP MVLVQIPMCN EKEVYQQSIA AVCNLDWPKT KILIQVLDDS DDPITQSLIK EEVHKWQKGG ARIVYRHRVN
301: REGYKAGNLK SAMNCSYVKD YEFVAIFDAD FQPLPDFLKK TIPHFKDNEE LGLVQARWSF VNKEENLLTR LQNINLAFHF EVEQQVNSVF LNFFGFNGTA
401: GVWRIKALED SGGWLERTTV EDMDIAVRAH LHGWKFIFLN DVECICELPE SYEAYRKQQH RWHSGPMQLF RLCLPAVIKS KISIGKKFNL IFLFFLLRKL
501: ILPFYSFTLF CIILPMTMFV PEAELPAWVV CYIPATMSFL NILPAPKSFP FIVPYLLFEN TMSVTKFNAM VSGLFQLGSA YEWVVTKKSG RSSEGDLAAL
601: VENEGGKKMK HQRGASAPAP ETEAEKKAQK KNNKKKKKHN RIYMKELSLA FLLLTAATRS LLSAQGIHFY FLLFQGISFL LVGLDLIGEQ VE
Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)
001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
Arabidopsis Description
CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.