Factsheet for HORVU1Hr1G077230.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G334400.1	Wheat	plasma membrane	98.71	98.29
TraesCS1B01G345400.1	Wheat	plasma membrane	98.57	98.15
TraesCS1A01G331800.1	Wheat	plasma membrane	98.28	97.86
Os05t0510800-01	Rice	plasma membrane	87.84	89.24
KXG22328	Sorghum	plasma membrane	87.84	88.09
Zm00001d038676_P001	Maize	plasma membrane	85.55	85.19
HORVU3Hr1G074570.1	Barley	plasma membrane	82.69	83.05
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.81	77.33
GSMUA_Achr7P00750_001	Banana	plasma membrane	68.53	76.76
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.81	76.49
GSMUA_Achr6P30200_001	Banana	cytosol	66.67	75.53
GSMUA_Achr5P01920_001	Banana	plasma membrane	69.38	75.31
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	60.52	74.6
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	72.96	72.44
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.24	71.24
KRH15467	Soybean	plasma membrane	70.53	70.53
Bra000635.1-P	Field mustard	plasma membrane	69.24	69.94
KRH61452	Soybean	plasma membrane	70.82	69.92
KRH52142	Soybean	plasma membrane	70.53	69.83
CDX83148	Canola	plasma membrane	69.1	69.8
HORVU1Hr1G067470.1	Barley	plasma membrane	67.95	69.14
AT4G07960.1	Thale cress	plasma membrane	68.81	68.81
PGSC0003DMT400030125	Potato	plasma membrane	65.24	68.47
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.1	68.17
PGSC0003DMT400012668	Potato	plasma membrane	69.1	65.09
Solyc04g077470.2.1	Tomato	plasma membrane	68.81	64.82
HORVU3Hr1G000340.2	Barley	plasma membrane	56.37	60.99
HORVU4Hr1G037380.1	Barley	cytosol, extracellular, mitochondrion, nucleus	7.01	49.0
HORVU6Hr1G034630.10	Barley	plasma membrane	32.33	43.63
HORVU7Hr1G092990.4	Barley	endoplasmic reticulum	29.33	42.98
HORVU7Hr1G092910.2	Barley	plasma membrane	31.62	42.91
HORVU2Hr1G028380.1	Barley	golgi, plasma membrane	32.05	41.18
HORVU6Hr1G018840.1	Barley	plastid	29.9	38.14
HORVU3Hr1G107340.2	Barley	plasma membrane	29.33	37.96
HORVU7Hr1G038440.1	Barley	cytosol, nucleus	30.9	37.96
HORVU3Hr1G109930.14	Barley	plasma membrane	30.19	37.21
HORVU4Hr1G000610.1	Barley	endoplasmic reticulum, plasma membrane, plastid	30.76	36.69
HORVU3Hr1G002660.1	Barley	endoplasmic reticulum, plasma membrane	29.47	35.4

Protein Annotations

EMBL:AK363253	EnsemblPlants:HORVU1Hr1G077230.2	EnsemblPlantsGene:HORVU1Hr1G077230	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF16	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002006896	UniProt:F2DH86	MapMan:21.2.1.1.1

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DH86]

Coordinates

chrchr1H:+:516783758..516787746

Molecular Weight (calculated)

78175.3 Da

IEP (calculated)

8.074

GRAVY (calculated)

0.068

Length

699 amino acids

Sequence
(BLAST)

001: MAPSFWGREA RLSDGGGGGG TPVVVKMENP NWSISEVEQE AVPGSPAAGK AGRGKNARQI TWVLLLKAHR AAGRLTGAAS AALAVAAAAR RRVAAGRTDG
101: DAAPGESTAL RARFYGCLRL FVVLSMLLLA VEVAAYLQGW HLEMPEMPEM PGQLAMDGLL AVDGLAAAAY AGWMRVRLQY IAPPLQFLTN ACVVLFMIQS
201: VDRLVLCLGC LWIKLRGIKP VPIAADKDDV EAGDEDFPMV LVQMPMCNER EVYQQSIGAI CNLDWPRSNF LVQVLDDSDD ATTSALIKEE VEKWQREGVR
301: IVYRHRVIRD GYKAGNLKSA MNCSYVKDYE YVVIFDADFQ PQADFLKRAM PHFKGKDDVG LVQARWSFVN NDENLLTRLQ NVNLCFHFEV EQQVNGAFLN
401: FFGFNGTAGV WRIKALEDSG GWMERTTVED MDIAVRAHLK GWKFLYLNDV ECQCELPESY EAYRKQQHRW HSGPMQLFRL CFVDIIKSKI GFWKKCNLIF
501: LFFLLRKLIL PFYSFTLFCV ILPMTMFVPE AELPAWVVCY IPAAMSIMSI LPSPKSFPFI VPYLLFENTM SVTKFNAMIS GLFQLGSAYE WVVTKKSGRS
601: SEGDLVALVE KHTVQQQQRV GSAPDLAGLA KDSSLPKKDA KKKQKHNRIY RKELALSFLL LTAAARSVLS AQGIHFYFLL FQGVSFLVMG LDLIGEQVE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.