CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0510800-01	Rice	plasma membrane	92.11	93.31
Zm00001d038676_P001	Maize	plasma membrane	92.25	91.6
TraesCS1A01G331800.1	Wheat	plasma membrane	88.52	87.89
HORVU1Hr1G077230.2	Barley	plasma membrane	88.09	87.84
TraesCS1D01G334400.1	Wheat	plasma membrane	88.24	87.61
TraesCS1B01G345400.1	Wheat	plasma membrane	88.24	87.61
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	85.51	86.5
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	70.59	79.1
GSMUA_Achr7P00750_001	Banana	plasma membrane	70.59	78.85
GSMUA_Achr5P01920_001	Banana	plasma membrane	71.88	77.8
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	63.27	77.78
GSMUA_Achr4P32270_001	Banana	plasma membrane	71.16	77.74
GSMUA_Achr6P30200_001	Banana	cytosol	67.86	76.66
EER90820	Sorghum	plasma membrane	75.75	76.3
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	74.89	74.15
KRH15467	Soybean	plasma membrane	73.6	73.39
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	73.31	73.1
Bra000635.1-P	Field mustard	plasma membrane	72.02	72.54
KRH61452	Soybean	plasma membrane	73.6	72.46
CDX83148	Canola	plasma membrane	71.88	72.4
KRH52142	Soybean	plasma membrane	73.31	72.38
AT4G07960.1	Thale cress	plasma membrane	71.45	71.24
PGSC0003DMT400030125	Potato	plasma membrane	67.29	70.42
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	69.15	70.06
KXG34323	Sorghum	plasma membrane	68.01	69.5
Solyc04g077470.2.1	Tomato	plasma membrane	72.02	67.66
PGSC0003DMT400012668	Potato	plasma membrane	71.45	67.12
KXG35666	Sorghum	mitochondrion, plasma membrane	64.28	64.0
KXG24822	Sorghum	peroxisome	63.85	58.55
EES06436	Sorghum	plasma membrane	33.0	44.15
KXG20409	Sorghum	plasma membrane, plastid	33.14	43.1
OQU76114	Sorghum	plasma membrane	29.84	42.45
EER95427	Sorghum	plasma membrane	31.99	40.77
OQU89056	Sorghum	mitochondrion, plasma membrane	30.7	38.91
EER97593	Sorghum	plasma membrane	31.56	38.39
KXG30765	Sorghum	plasma membrane	29.84	38.24
KXG25219	Sorghum	plasma membrane	31.13	37.48
OQU91819	Sorghum	plasma membrane	30.99	34.95

Protein Annotations

EnsemblPlants:KXG22328	EnsemblPlantsGene:SORBI_3009G194200	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF16	PFAM:PF13641	ProteinID:KXG22328
ProteinID:KXG22328.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI00081AD958	UniProt:A0A1B6P9G2
MapMan:21.2.1.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:54555817..54559436

Molecular Weight (calculated)

77900.5 Da

IEP (calculated)

8.454

GRAVY (calculated)

0.080

Length

697 amino acids

Sequence
(BLAST)

001: MAPSWWGRDA RANGVVSGGG GTPVVVKMEN PNWSISEVAA SEVSPGSPAG AGGGKAGRGK NARQITWVLL LRAHRAAGRL TGAASAALAV AAAARRRVAA
101: GRTDSDAAPG ESTALRTRFY GCIRVFLVLS LLLLAVEVAA YFQGWHLSVS LEEEVDAGLQ AVDGLFAAAY AAWMRARLDY LAPPLQFLTN ACVVLFLIQS
201: VDRIVLCLGC FWIRLKGIKP VPLAAADKED VEAGPEDFPM VLVQMPMCNE REVYQQSIGA VCSLDWPRSN FLVQVLDDSD DATTSALIKE EVEKWQREGV
301: RIVYRHRVIR DGYKAGNLKS AMNCSYVKDY EFVVIFDADF QPQADFLKRT VPHFKGKDDV GLVQARWSFV NKDENLLTRL QNINLCFHFE VEQQVNGAFL
401: NFFGFNGTAG VWRIKALEES GGWMERTTVE DMDIAVRAHL KGWKFLFLND VECQCELPES YEAYRKQQHR WHSGPMQLFR LCFVDIIKSK IGFWKKFNLI
501: FLFFLLRKLI LPFYSFTLFC VILPMTMFVP EAELPAWVVC YIPATMSILN ILPAPKSFPF IVPYLLFENT MSVTKFNAMI SGLFQLGSAY EWVVTKKSGR
601: SSEGDLLALV EKHSKQQRVG SAPNLDALTK EESNPKKDTK KKKHNRIYRK ELALSFLLLT AAARSLLSAQ GIHFYFLLFQ GVSFLVVGLD LIGEQVD

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.