CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52142	Soybean	plasma membrane	97.32	97.59
KRH15467	Soybean	plasma membrane	84.46	85.55
Os01t0766900-01	Rice	golgi, plasma membrane	20.62	84.88
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	83.05	84.12
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	66.53	83.07
GSMUA_Achr7P00750_001	Banana	plasma membrane	71.89	81.57
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	70.76	80.55
GSMUA_Achr5P01920_001	Banana	plasma membrane	72.88	80.12
GSMUA_Achr4P32270_001	Banana	plasma membrane	72.03	79.94
Bra000635.1-P	Field mustard	plasma membrane	77.54	79.34
CDX83148	Canola	plasma membrane	77.4	79.19
GSMUA_Achr6P30200_001	Banana	cytosol	68.79	78.93
AT4G07960.1	Thale cress	plasma membrane	77.68	78.68
PGSC0003DMT400030125	Potato	plasma membrane	72.32	76.88
Os03t0770800-01	Rice	plasma membrane	64.12	76.17
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	75.71	76.14
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	73.87	76.02
Solyc04g077470.2.1	Tomato	plasma membrane	79.24	75.61
PGSC0003DMT400012668	Potato	plasma membrane	78.53	74.93
EER90820	Sorghum	plasma membrane	72.6	74.28
Os05t0510800-01	Rice	plasma membrane	72.03	74.13
KXG22328	Sorghum	plasma membrane	72.46	73.6
TraesCS5A01G405700.1	Wheat	mitochondrion	73.02	73.54
Zm00001d034205_P001	Maize	plasma membrane	72.88	72.78
TraesCS5B01G410400.1	Wheat	mitochondrion	72.88	72.47
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	70.48	72.42
Zm00001d012666_P003	Maize	plasma membrane	70.2	72.24
Zm00001d013168_P001	Maize	plasma membrane	69.92	72.16
Zm00001d043336_P001	Maize	plasma membrane	68.93	71.45
Zm00001d038676_P001	Maize	plasma membrane	70.76	71.37
HORVU3Hr1G074570.1	Barley	plasma membrane	69.92	71.12
HORVU1Hr1G077230.2	Barley	plasma membrane	69.92	70.82
TraesCS3B01G337100.1	Wheat	plasma membrane	69.77	70.77
TraesCS3A01G299500.1	Wheat	plasma membrane	70.2	70.6
TraesCS3D01G302300.1	Wheat	plasma membrane	69.92	70.31
TraesCS5D01G415700.1	Wheat	mitochondrion	73.02	70.24
TraesCS1B01G345400.1	Wheat	plasma membrane	69.63	70.23
TraesCS1D01G334400.1	Wheat	plasma membrane	69.63	70.23
TraesCS1A01G331800.1	Wheat	plasma membrane	69.49	70.09
TraesCS1D01G312700.1	Wheat	plasma membrane	67.8	69.57
HORVU1Hr1G067470.1	Barley	plasma membrane	67.09	69.14
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	67.37	69.13
Os07t0124750-00	Rice	plasma membrane	69.63	68.95
TraesCS1B01G324200.1	Wheat	mitochondrion	66.95	68.7
KRH52609	Soybean	plasma membrane	65.68	67.1
KXG34323	Sorghum	plasma membrane	64.55	67.01
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	65.11	66.62
KRH61950	Soybean	plasma membrane	64.97	66.38
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	61.72	66.21
KRG93391	Soybean	plasma membrane	61.44	65.91
KRH44638	Soybean	cytosol	64.69	65.71
KRH16165	Soybean	plasma membrane	64.27	65.66
KRH04930	Soybean	plasma membrane	63.98	65.37
KRH07420	Soybean	plasma membrane	61.44	62.32
KRH66156	Soybean	endoplasmic reticulum	61.86	61.95
KRH57821	Soybean	plasma membrane	15.4	45.23
KRH67832	Soybean	plasma membrane	33.19	44.09
KRG96119	Soybean	plasma membrane	33.19	44.09
KRG92056	Soybean	plasma membrane	32.2	43.1
KRH34719	Soybean	plasma membrane	31.92	42.72
KRH20021	Soybean	plasma membrane	30.79	42.66
KRH32645	Soybean	plasma membrane	30.51	42.27
KRH30518	Soybean	endoplasmic reticulum	31.92	41.7
KRH22736	Soybean	plasma membrane	31.36	41.65
KRH25159	Soybean	endoplasmic reticulum	31.78	41.44
KRH55858	Soybean	cytosol	6.64	41.23
KRH67729	Soybean	plasma membrane	29.1	39.09
KRG96022	Soybean	plasma membrane	29.1	39.02

Protein Annotations

EMBL:ACUP02002166	EnsemblPlants:KRH61452	EnsemblPlantsGene:GLYMA_04G048100	EntrezGene:100805969	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044
PANTHER:PTHR32044:SF45	PFAM:PF13641	ProteinID:KRH61452	ProteinID:KRH61452.1	SEG:seg	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI000233952C	UniProt:I1JTT4	MapMan:21.2.1.1.1	:	:

Description

hypothetical protein

Coordinates

chr4:-:3882298..3887192

Molecular Weight (calculated)

80709.4 Da

IEP (calculated)

8.302

GRAVY (calculated)

0.008

Length

708 amino acids

Sequence
(BLAST)

001: MAPPLFNWGV KDTHRGTPVV VKMENPNWSM VELEGPEEED LMLTNSPSSG VSRDKGRGKN AKQLTWVLLL KAHRAAGCLT SLAPALVGLV AAVKRRVAAG
101: KTDADTGGGR ENENPAVKTR FYSCIKLFLC LSVVLLVFEI AAYFEGWYFG AARFQLEHLL WAPSFGVKGF FDWLYARWVF VRVEYLAPPL QFLTNACIVL
201: FLIQSMDRLV LCLGCFWIRF KKIKPVPKGG GVVDLESGEE KGFSFSPMVL VQIPMCNEKE VYQQSIAAVC NLDWPKGKLL IQVLDDSDDP TTQSLIKEEV
301: QKWQQEGANI LYRHRVIRDG YKAGNLKSAM NCSYLKDYEF VAIFDADFQP TPDFLKKTVP HFKDNDDLGL VQARWSFVNR DENLLTRLQN INLSFHFEVE
401: QQVNGIFINF FGFNGTAGVW RIKTLEDAGG WLERTTVEDM DIAVRAHLHG WKFIFLNDVE CQCELPESYE AYRKQQHRWH SGPMQLFRLC LPDIIRAKIS
501: VWKKFNMIFL FFLLRKLILP FYSFTLFCII LPMTMFVPEA ELPAWVVCYI PAAMSFLNIL PAPKAFPFIV PYLLFENTMS VTKFNAMISG LFQLGSAYEW
601: VVTKKSGRSS EGDLVSLIEK GPKHQRGSSA PDLEEMKEEL RKQEQQKASK KKKKHNRIYM KELALAFLLL TASARSLLSA QGIHFYFLLF QGISFLLVGL
701: DLIGEQVD

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.