CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32645	Soybean	plasma membrane	58.77	13.11
KRH20021	Soybean	plasma membrane	58.77	13.11
KRH34719	Soybean	plasma membrane	56.14	12.1
KRG92056	Soybean	plasma membrane	55.26	11.91
KRG96119	Soybean	plasma membrane	55.26	11.82
KRH67832	Soybean	plasma membrane	54.39	11.63
KRH30518	Soybean	endoplasmic reticulum	50.0	10.52
KRH22736	Soybean	plasma membrane	49.12	10.51
KRH25159	Soybean	endoplasmic reticulum	50.0	10.5
KRH67729	Soybean	plasma membrane	48.25	10.44
KRG96022	Soybean	plasma membrane	45.61	9.85
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	42.98	7.42
KRG93391	Soybean	plasma membrane	42.98	7.42
KRH04930	Soybean	plasma membrane	44.74	7.36
KRH52609	Soybean	plasma membrane	42.98	7.07
KRH61950	Soybean	plasma membrane	42.98	7.07
KRH16165	Soybean	plasma membrane	42.98	7.07
KRH44638	Soybean	cytosol	42.11	6.89
KRH07420	Soybean	plasma membrane	41.23	6.73
KRH15467	Soybean	plasma membrane	41.23	6.72
KRH52142	Soybean	plasma membrane	41.23	6.66
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	40.35	6.65
KRH61452	Soybean	plasma membrane	41.23	6.64
KRH66156	Soybean	endoplasmic reticulum	40.35	6.51
KRH57821	Soybean	plasma membrane	0.0	0.0

Protein Annotations

EMBL:ACUP02004063	EnsemblPlants:KRH55858	EnsemblPlantsGene:GLYMA_06G286500	PANTHER:PTHR32044	PANTHER:PTHR32044:SF10	ProteinID:KRH55858
ProteinID:KRH55858.1	UniParc:UPI0002950160	UniProt:K7KXZ0	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr6:+:47483449..47485045

Molecular Weight (calculated)

13353.8 Da

IEP (calculated)

4.663

GRAVY (calculated)

-0.167

Length

114 amino acids

Sequence
(BLAST)

001: MECSRWASKG LNIKYEEVAT WDDQDARDVT DYHFIVEQEV GSCTYAFFGF NGIAGVWRIS TLYESEGWNH RTTVEILLYL LNSIYDQNLM CVYVRTCDKF
101: ELQILAPNIL HKLK

Best Arabidopsis Sequence Match ( AT5G03760.1 )
(BLAST)

001: MELGDTTSVI PDSFMGYRDD ITMQMSMVLD QIRAPLIVPA LRLGVYICLT MSVMLFVERV YMGIVISLVK LFGRKPDKRF KYEPIKDDIE LGNSAYPMVL
101: IQIPMFNERE VYQLSIGAAC GLSWPSDRIV IQVLDDSTDP TIKDLVEMEC SRWASKGVNI KYEIRDNRNG YKAGALKEGM KKSYVKSCDY VAIFDADFQP
201: EADFLWRTVP YLLHNPKLAL VQARWKFVNS DECLMTRMQE MSLDYHFTVE QEVGSSTYAF FGFNGTAGIW RISALNEAGG WKDRTTVEDM DLAVRASLKG
301: WKFLYLGSLK VKNELPSTFK AYRYQQHRWS CGPANLFRKM AFEIMTNKNV TLWKKVHVIY SFFVVRKLVA HIVTFIFYCV ILPATVLVPE VTVPKWGAVY
401: IPSVITLLNA VGTPRSLHLM VFWILFENVM SLHRTKATFI GLLEGGRVNE WIVTEKLGDV KAKSATKTSK KVIRFRFGDR IHVLELGVGM YLLFVGCYDA
501: FFGKNHYYLY LFAQAIAFFI AGFGQIGTIV PNH

Arabidopsis Description

CSLA9RAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UH35]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.