CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH26664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G31590.1	KRH22653	AT5G22290.1	21798944
AT4G31590.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16165	Soybean	plasma membrane	97.51	33.91
KRH04930	Soybean	plasma membrane	90.87	31.6
KRH61950	Soybean	plasma membrane	75.93	26.41
KRH52609	Soybean	plasma membrane	74.69	25.97
VIT_04s0069g00780.t01	Wine grape	plasma membrane	70.54	24.5
AT4G31590.1	Thale cress	plasma membrane	65.15	22.69
Bra023993.1-P	Field mustard	plasma membrane	60.58	21.95
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	63.07	21.9
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	62.66	21.76
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	61.83	21.5
CDX72314	Canola	plasma membrane	60.58	21.34
CDY13445	Canola	plasma membrane	60.58	21.25
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	60.17	21.01
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	58.92	20.76
CDX68766	Canola	plasma membrane	63.9	19.87
KRH47014	Soybean	cytosol, golgi, peroxisome, plastid	56.85	19.8
KRH44638	Soybean	cytosol	55.6	19.23
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	51.87	18.94
CDX76802	Canola	plasma membrane	51.04	18.64
CDY60854	Canola	plasma membrane	63.49	17.49
Bra011284.1-P	Field mustard	plasma membrane	63.49	15.76
KRH15467	Soybean	plasma membrane	44.81	15.45
KRH61452	Soybean	plasma membrane	45.23	15.4
KRH52142	Soybean	plasma membrane	43.98	15.01
Zm00001d049336_P001	Maize	plasma membrane	47.3	14.92
KRH18597	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	39.83	14.55
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	45.23	14.53
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	45.64	14.53
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	45.23	14.51
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	45.64	14.51
KRG93391	Soybean	plasma membrane	39.42	14.39
KXG24822	Sorghum	peroxisome	45.23	14.34
KRH07420	Soybean	plasma membrane	34.44	11.89
KRH66156	Soybean	endoplasmic reticulum	34.85	11.88
HORVU3Hr1G000340.2	Barley	plasma membrane	28.63	10.68
KRG96119	Soybean	plasma membrane	14.94	6.75
KRH67832	Soybean	plasma membrane	14.52	6.57
KRH34719	Soybean	plasma membrane	14.11	6.43
KRG92056	Soybean	plasma membrane	14.11	6.43
KRH22736	Soybean	plasma membrane	13.28	6.0
KRH32645	Soybean	plasma membrane	12.45	5.87
KRH20021	Soybean	plasma membrane	12.45	5.87
KRH30518	Soybean	endoplasmic reticulum	12.86	5.72
KRH25159	Soybean	endoplasmic reticulum	12.86	5.71
KRH67729	Soybean	plasma membrane	11.62	5.31
KRG96022	Soybean	plasma membrane	11.62	5.3
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	2.9	1.46
KRH55858	Soybean	cytosol	0.0	0.0
CDY57881	Canola	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02002926	EnsemblPlants:KRH57821	EnsemblPlantsGene:GLYMA_05G086400	EntrezGene:102659624	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	ProteinID:KRH57821	ProteinID:KRH57821.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI00023C4D32	UniProt:K7KP25	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:16026473..16028601

Molecular Weight (calculated)

27544.1 Da

IEP (calculated)

9.245

GRAVY (calculated)

0.230

Length

241 amino acids

Sequence
(BLAST)

001: MAPSFDFSNR WMKETQKSTP VVVTMENPTF SVVEINGVDA AFRPVEKTRS KNAKQVTWFL FLKAYHAIGC VTWFATVLWS LMGAKRKRLI DREGVTLESE
101: KMEKGKVLFT VIKVFLVSSL VVLVFEVVAY LQGWHFGNPS LHIPRAADLE GLMHLVYVAW LRFRGEYIAP PMQALSKFCI VLFLIQSVDR MVLCFGCFWI
201: KYKRIKPKID GDALKVDDIE GSACSHPMVL VQIPMCNERE V

Best Arabidopsis Sequence Match ( AT2G24630.1 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.