Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31590.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT4G31590.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023993.1-P | Field mustard | plasma membrane | 96.22 | 99.4 |
| CDX72314 | Canola | plasma membrane | 97.38 | 97.81 |
| AT4G31590.1 | Thale cress | plasma membrane | 95.34 | 94.65 |
| CDY34762 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 87.05 | 87.43 |
| CDX76802 | Canola | plasma membrane | 83.55 | 86.97 |
| CDX68766 | Canola | plasma membrane | 96.65 | 85.68 |
| VIT_04s0069g00780.t01 | Wine grape | plasma membrane | 82.1 | 81.27 |
| CDY04011 | Canola | cytosol, peroxisome, plasma membrane | 53.28 | 80.09 |
| KRH61950 | Soybean | plasma membrane | 80.2 | 79.51 |
| CDY00138 | Canola | cytosol, peroxisome, plasma membrane | 52.84 | 79.43 |
| VIT_09s0018g01950.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 79.91 | 79.22 |
| KRH52609 | Soybean | plasma membrane | 79.48 | 78.79 |
| Os08t0253800-01 | Rice | cytosol, peroxisome, plasma membrane | 54.0 | 77.45 |
| CDY57881 | Canola | extracellular | 13.97 | 76.8 |
| KRH16165 | Soybean | plasma membrane | 77.0 | 76.33 |
| PGSC0003DMT400024646 | Potato | golgi, peroxisome, plasma membrane | 76.56 | 75.79 |
| CDY60854 | Canola | plasma membrane | 96.36 | 75.66 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 76.27 | 75.5 |
| KRH04930 | Soybean | plasma membrane | 76.13 | 75.47 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 58.52 | 70.9 |
| CDX85189 | Canola | plasma membrane | 66.67 | 69.71 |
| CDX86448 | Canola | plasma membrane | 66.52 | 69.56 |
| CDY20029 | Canola | plasma membrane | 66.08 | 69.0 |
| CDX83148 | Canola | plasma membrane | 66.96 | 66.47 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 62.45 | 66.41 |
| TraesCSU01G038900.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.72 | 63.87 |
| TraesCS3B01G000600.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.58 | 63.65 |
| TraesCS3D01G010500.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.58 | 63.06 |
| Zm00001d049336_P001 | Maize | plasma membrane | 70.01 | 62.96 |
| Zm00001d024178_P002 | Maize | cytosol, peroxisome, plasma membrane | 69.29 | 62.88 |
| KXG24822 | Sorghum | peroxisome | 69.0 | 62.37 |
| KRH57821 | Soybean | plasma membrane | 21.25 | 60.58 |
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 60.41 | 59.71 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 60.41 | 59.37 |
| CDY47235 | Canola | plasma membrane | 27.51 | 57.98 |
| CDX75177 | Canola | cytosol | 21.69 | 51.2 |
| CDY32100 | Canola | cytosol | 1.16 | 47.06 |
| CDX69464 | Canola | cytosol, peroxisome, plasma membrane | 28.97 | 44.92 |
| CDX70677 | Canola | cytosol, peroxisome, plasma membrane | 28.97 | 44.92 |
| CDY47369 | Canola | plasma membrane | 19.51 | 44.67 |
| CDY09672 | Canola | golgi | 22.85 | 44.6 |
| CDY11268 | Canola | plasma membrane | 34.5 | 44.55 |
| CDY10358 | Canola | plasma membrane | 34.5 | 44.55 |
| CDX70286 | Canola | plasma membrane | 34.35 | 44.36 |
| CDX78675 | Canola | plasma membrane | 30.86 | 42.06 |
| CDY26505 | Canola | plasma membrane | 31.0 | 41.52 |
| CDY47368 | Canola | endoplasmic reticulum, extracellular | 3.49 | 41.38 |
| CDY35710 | Canola | plasma membrane | 30.71 | 41.29 |
| CDX79614 | Canola | plasma membrane | 33.04 | 41.2 |
| CDY32110 | Canola | mitochondrion | 26.35 | 41.14 |
| CDX88785 | Canola | plasma membrane | 30.42 | 40.98 |
| CDY09164 | Canola | plasma membrane | 30.42 | 40.98 |
| CDY26949 | Canola | plasma membrane | 30.28 | 40.78 |
| CDX71011 | Canola | plasma membrane | 30.28 | 40.78 |
| CDY40295 | Canola | plasma membrane | 32.31 | 40.66 |
| CDY44151 | Canola | plasma membrane | 32.75 | 40.54 |
| CDY04707 | Canola | plasma membrane | 32.75 | 40.54 |
| CDX72181 | Canola | plasma membrane | 30.71 | 40.34 |
| CDY01129 | Canola | plasma membrane | 31.59 | 40.33 |
| CDY32098 | Canola | plasma membrane | 31.88 | 40.33 |
| CDY54604 | Canola | plasma membrane | 30.42 | 39.89 |
| CDX90506 | Canola | plasma membrane | 30.71 | 38.16 |
| CDY68733 | Canola | plasma membrane | 14.99 | 37.87 |
| CDY40448 | Canola | plasma membrane | 32.02 | 37.16 |
| CDX80885 | Canola | plasma membrane | 27.95 | 36.57 |
| CDX84607 | Canola | mitochondrion | 4.8 | 27.5 |
| CDX92340 | Canola | plasma membrane | 30.57 | 22.22 |
Protein Annotations
| EnsemblPlants:CDY13445 | EnsemblPlantsGene:GSBRNA2T00077737001 | Gene3D:3.90.550.10 | GO:A0A078FG72 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF7 | PFAM:PF13641 |
| ProteinID:CDY13445 | ProteinID:CDY13445.1 | SEG:seg | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI0004EEF5CE |
| UniProt:A0A078FG72 | MapMan:21.2.1.1.1 | : | : | : | : |
Description
BnaA03g51630DBnaA03g51630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG72]
Coordinates
chrLK032035:-:349114..351905
Molecular Weight (calculated)
79137.9 Da
IEP (calculated)
8.342
GRAVY (calculated)
0.111
Length
687 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIEGPDS AFRPVERSRG RKNAKQVTWV LLLKAHRAVG CLTWLATVFW SLLGSIKKRL SFTHPLGSER
101: LGRDRWLFSA IKLFLAVSLL ILGFEIVAYL RGWHYFENHI PTSTLEIQSL LHLVYVGWLG LRADYIAPLI KALSKFCIVL FLIQSVDRLI LCLGCFWIKY
201: KKIMPRFDEE PFGDDDAEGC GYVYPMVLVQ IPMCNEREVY EQSISAVCQL DWPKDRILVQ VLDDSNDESI QQLIKAEVNK WSQKGVNIIY RHRLVRTGYK
301: AGNLKSAMSC DYVEAYEFVA IFDADFQPNP DFLKLTVPHF KDNPELGLVQ ARWTFVNKDE NLLTRLQNIN LCFHFEVEQQ VSGVFLNFFG FNGTAGVWRI
401: KALEESGGWL ERTTVEDMDI AVRAHLHGWK FIYLNDVKVL CEVPESYEAY KKQQHRWHSG PMQLFRLCLG SILTSKIAIW KKANLILLFF LLRKLILPFY
501: SFTLFCIILP LTMFVPEAEL PVWVICYIPV FMSFLNLLPS PKSFPFIVPY LLFENTMSVT KFNAMVSGLF QLGSSYEWIV TKKAGRSSES DLLSITEKET
601: LDKRSQLLRG VSDSELLELN QLEEQKQRKP VKKTNKIFHK ELALAFLLLT AAVRSLLAAQ GVHFYFLLFQ GVTFLLVGLD LIGEQMS
101: LGRDRWLFSA IKLFLAVSLL ILGFEIVAYL RGWHYFENHI PTSTLEIQSL LHLVYVGWLG LRADYIAPLI KALSKFCIVL FLIQSVDRLI LCLGCFWIKY
201: KKIMPRFDEE PFGDDDAEGC GYVYPMVLVQ IPMCNEREVY EQSISAVCQL DWPKDRILVQ VLDDSNDESI QQLIKAEVNK WSQKGVNIIY RHRLVRTGYK
301: AGNLKSAMSC DYVEAYEFVA IFDADFQPNP DFLKLTVPHF KDNPELGLVQ ARWTFVNKDE NLLTRLQNIN LCFHFEVEQQ VSGVFLNFFG FNGTAGVWRI
401: KALEESGGWL ERTTVEDMDI AVRAHLHGWK FIYLNDVKVL CEVPESYEAY KKQQHRWHSG PMQLFRLCLG SILTSKIAIW KKANLILLFF LLRKLILPFY
501: SFTLFCIILP LTMFVPEAEL PVWVICYIPV FMSFLNLLPS PKSFPFIVPY LLFENTMSVT KFNAMVSGLF QLGSSYEWIV TKKAGRSSES DLLSITEKET
601: LDKRSQLLRG VSDSELLELN QLEEQKQRKP VKKTNKIFHK ELALAFLLLT AAVRSLLAAQ GVHFYFLLFQ GVTFLLVGLD LIGEQMS
001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
Arabidopsis Description
CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.