Factsheet for Zm00001d024178_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049336_P001	Maize	plasma membrane	94.98	94.11
KXG24822	Sorghum	peroxisome	94.06	93.68
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	56.41	89.14
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	80.45	81.09
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	80.32	81.07
HORVU3Hr1G000340.2	Barley	plasma membrane	68.96	80.81
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	80.85	80.74
KRH52609	Soybean	plasma membrane	65.39	71.43
KRH61950	Soybean	plasma membrane	65.26	71.28
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	65.13	71.14
VIT_04s0069g00780.t01	Wine grape	plasma membrane	64.99	70.89
CDX76802	Canola	plasma membrane	61.43	70.45
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	61.29	70.3
CDX72314	Canola	plasma membrane	63.41	70.18
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	63.54	69.71
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	62.88	69.59
AT4G31590.1	Thale cress	plasma membrane	63.54	69.51
Bra023993.1-P	Field mustard	plasma membrane	60.9	69.32
CDY13445	Canola	plasma membrane	62.88	69.29
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	62.75	68.44
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	62.48	68.16
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	62.62	67.81
KRH16165	Soybean	plasma membrane	61.96	67.68
KRH04930	Soybean	plasma membrane	61.56	67.24
Zm00001d012666_P003	Maize	plasma membrane	57.73	63.52
CDY57881	Canola	extracellular	10.44	63.2
Zm00001d013168_P001	Maize	plasma membrane	56.94	62.83
Zm00001d038676_P001	Maize	plasma membrane	58.26	62.82
Zm00001d034205_P001	Maize	plasma membrane	58.78	62.76
Zm00001d043336_P001	Maize	plasma membrane	56.54	62.66
CDX68766	Canola	plasma membrane	63.54	62.06
Zm00001d009569_P001	Maize	cytosol	7.93	55.56
CDY60854	Canola	plasma membrane	63.54	54.97
Zm00001d010680_P002	Maize	cytosol	5.68	49.43
Bra011284.1-P	Field mustard	plasma membrane	63.28	49.33
KRH57821	Soybean	plasma membrane	14.53	45.64
Zm00001d010955_P001	Maize	extracellular	10.44	42.7
Zm00001d046681_P001	Maize	plasma membrane	29.06	41.83
Zm00001d043714_P001	Maize	cytosol	20.87	40.51
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	28.4	40.04
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	28.53	40.0
Zm00001d032994_P002	Maize	plasma membrane	27.08	39.88
Zm00001d022230_P001	Maize	vacuole	29.99	39.62
Zm00001d053696_P003	Maize	plasma membrane	29.19	38.91
Zm00001d018032_P001	Maize	plasma membrane	27.08	37.68
Zm00001d050406_P008	Maize	plasma membrane	28.01	37.66
Zm00001d048319_P003	Maize	plasma membrane	27.08	36.94
Zm00001d032188_P001	Maize	plasma membrane	27.48	36.49
Zm00001d043719_P001	Maize	plasma membrane	8.19	31.47
Zm00001d005305_P001	Maize	plasma membrane	9.11	30.53

Protein Annotations

EnsemblPlants:Zm00001d024178_P002	EnsemblPlants:Zm00001d024178_T002	EnsemblPlantsGene:Zm00001d024178	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans
PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641	ProteinID:AQK40738.1	SEG:seg	SUPFAM:SSF53448
TMHMM:TMhelix	UniParc:UPI00022170F2	UniProt:K7TGP8	MapMan:21.2.1.1.1	:	:

Description

Xyloglucan glycosyltransferase 4

Coordinates

chr10:-:53430604..53434813

Molecular Weight (calculated)

86081.8 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.056

Length

757 amino acids

Sequence
(BLAST)

001: MAPPSSWWGG EDQDGTPVVV KMDNPYSLVE IDGLGVPPAD KARGKNAKQF TWVLLLRAHR AVGCVAWLAG GFWGVLGAVN RRVRRSRDAD DEPDAEASGR
101: GRAMLRFLRA FLLLSLAMLA FETVAHLKGW QFPQHLPGNL QELEEQLQHL PEHLRHLPEN LRQLPDHLRM PERQEIQGWL HRAYVAWLEF RVDYIAWAIQ
201: KLSSFCILLF MVQSVDRIVQ CLACFWIKIR GIKPRVPASG GKPRGTTGRK SADAENGFAD GDADGYFPMV LVQMPMCNEK EVYETSISHV CQIDWPRDRL
301: LIQVLDDSDD EVCRMLIKAE VTKWSQRGVN VIYRHRLSRT GYKAGNLKSA MACDYVKDYE FVAIFDADFQ PNPDFLKLTV PHFKENPELG LVQARWSFVN
401: KDENLLTRLQ NINLCFHFEV EQQVNGVYLN FFGFNGTAGV WRIKALEDSG GWMERTTVED MDIAVRAHLN GWKFIFLNDV KVLCELPESY QAYRKQQHRW
501: HSGPMQLFRL CIPAVFRSKI PFWKKANLVM LFFLLRKLVL PFYSFTLFCV ILPLTMFVPE AELPIWVICY IPVLMSLLNI LPAPKSFPFV IPYLLFENTM
601: SVTKFNAMVS GLFQLGSSYE WIVTKKAGRT SSASDILALA EADSHAPLPP PAKLVRRVSE GGLQEWSRLR EQETAEWANK EEAAAALAAA APATPKMTRK
701: TKKPNRIFKK ELALACLLLT AATRSLLSKQ GLHFYFLLFQ GVTFLAVGLD LIGEQVS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.