Factsheet for Zm00001d018032_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010680_P002	Maize	cytosol	15.07	94.25
Zm00001d009569_P001	Maize	cytosol	18.57	93.52
KXG30765	Sorghum	plasma membrane	89.34	89.34
Os08t0434632-01	Rice	cytosol	11.21	80.26
TraesCS3B01G540800.1	Wheat	plasma membrane	65.99	67.23
TraesCS3D01G485600.1	Wheat	plasma membrane	65.26	65.14
HORVU3Hr1G107340.2	Barley	plasma membrane	63.79	64.26
Zm00001d046681_P001	Maize	plasma membrane	54.04	55.89
Zm00001d032994_P002	Maize	plasma membrane	50.55	53.5
Zm00001d050406_P008	Maize	plasma membrane	54.23	52.4
Zm00001d053696_P003	Maize	plasma membrane	54.6	52.29
Zm00001d037235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	51.29	51.67
Zm00001d032188_P001	Maize	plasma membrane	53.12	50.7
Zm00001d048319_P003	Maize	plasma membrane	49.63	48.65
Zm00001d043716_P001	Maize	mitochondrion, plasma membrane	47.98	48.6
Zm00001d043714_P001	Maize	cytosol	33.27	46.41
Zm00001d022230_P001	Maize	vacuole	45.96	43.63
Zm00001d043719_P001	Maize	plasma membrane	14.34	39.59
Zm00001d005305_P001	Maize	plasma membrane	16.18	38.94
Zm00001d043336_P001	Maize	plasma membrane	38.24	30.45
Zm00001d012666_P003	Maize	plasma membrane	38.42	30.38
Zm00001d020560_P001	Maize	mitochondrion, plasma membrane	38.79	30.19
Zm00001d038676_P001	Maize	plasma membrane	38.24	29.63
Zm00001d013168_P001	Maize	plasma membrane	36.4	28.86
Zm00001d034205_P001	Maize	plasma membrane	36.4	27.93
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	37.68	27.08
Zm00001d049336_P001	Maize	plasma membrane	37.87	26.96
Zm00001d010955_P001	Maize	extracellular	4.23	12.43

Protein Annotations

EnsemblPlants:Zm00001d018032_P001	EnsemblPlants:Zm00001d018032_T001	EnsemblPlantsGene:Zm00001d018032	EntrezGene:100193757	Gene3D:3.90.550.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044
PANTHER:PTHR32044:SF18	PFAM:PF13641	ProteinID:AQK74858.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI000845597B	UniProt:A0A1D6HKA0	MapMan:21.2.3.1.1.1	:	:	:

Description

Probable mannan synthase 7

Coordinates

chr5:-:212488580..212492036

Molecular Weight (calculated)

61758.3 Da

IEP (calculated)

7.897

GRAVY (calculated)

0.206

Length

544 amino acids

Sequence
(BLAST)

001: MGAAAAGGHA LRAVGDVVSF PATVAAFVEA LLQGWAEARA GLLVPLLRAA VLLCTAMSLI VLAEKVFLGA VSSVAKLRRR RPGRVCRCDP DEEAAAASQA
101: YPMVLVQIPM YNEREESVTR TQVYQLSIEA ACRLTWPVDR LIVQVLDDST DSVIKELVKG ECERWATEEG INVKYETRKD RAGYKAGNLK EGMRHAYVRA
201: CEFVAMFDAD FQPPPDFLVR TVPFLVHNPS LALVQTRWKF VNANDCLLTR MQEMSMDYHF KVEQEAGSSL CNFFGYNGTA GVWRTQAIVE SGGWEDRTTA
301: EDMDLALRAG LLGWEFVYVG SIKVKSELPS TLKAYRSQQH RWSCGPALLF KKMFWQILAA ERVSVWKKWY MVYDFFIARR IVGTFYTFFF FSVLIPLNIL
401: LPEAQIPVWE LIYIPIAITL LNSVGTPRSI HLVILWVLFE NVMALHRFKA ILIGFLEADR ANEWIVTQKL GNLQKLKSIA RLTGSYRFKD RFHFLEVFIG
501: LFLLASACFD YLYRDDYVYL FVLPQSIMYF AIGFQFVGLN VSED

Best Arabidopsis Sequence Match ( AT1G23480.1 )
(BLAST)

001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV

Arabidopsis Description

CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.