Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G540800.1 | Wheat | plasma membrane | 87.96 | 88.95 |
| TraesCS3D01G485600.1 | Wheat | plasma membrane | 89.44 | 88.62 |
| Zm00001d010680_P002 | Maize | cytosol | 13.15 | 81.61 |
| Zm00001d009569_P001 | Maize | cytosol | 14.26 | 71.3 |
| Os08t0434632-01 | Rice | cytosol | 10.0 | 71.05 |
| KXG30765 | Sorghum | plasma membrane | 64.44 | 63.97 |
| Zm00001d018032_P001 | Maize | plasma membrane | 64.26 | 63.79 |
| HORVU4Hr1G037380.1 | Barley | cytosol, extracellular, mitochondrion, nucleus | 10.19 | 55.0 |
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 47.59 | 53.88 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 51.3 | 53.79 |
| HORVU6Hr1G034630.10 | Barley | plasma membrane | 51.3 | 53.47 |
| HORVU3Hr1G109930.14 | Barley | plasma membrane | 49.63 | 47.27 |
| HORVU6Hr1G018840.1 | Barley | plastid | 47.96 | 47.26 |
| HORVU7Hr1G038440.1 | Barley | cytosol, nucleus | 49.26 | 46.75 |
| HORVU4Hr1G000610.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 50.0 | 46.08 |
| HORVU3Hr1G002660.1 | Barley | endoplasmic reticulum, plasma membrane | 49.07 | 45.53 |
| HORVU2Hr1G028380.1 | Barley | golgi, plasma membrane | 43.33 | 43.01 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 40.56 | 31.47 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 37.41 | 31.27 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 37.96 | 29.33 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 36.48 | 28.68 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G107340.2 | EnsemblPlantsGene:HORVU3Hr1G107340 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF18 | PFAM:PF13641 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000B481E65 | UniProt:A0A287ML51 | MapMan:21.2.3.1.1.1 | : |
Description
No Description!
Coordinates
chrchr3H:+:672947214..672950887
Molecular Weight (calculated)
60746.9 Da
IEP (calculated)
9.213
GRAVY (calculated)
0.071
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQHHAGRHR LTAMLAGAAE SFDRLTVSLS PAVVAFLRRL LRAWSALSVP LLRGAVMLCM GMSLMVLAEK VLLGTVSAAA NVLRRRQRRP ATHDVPVQPD
101: VEAGGGSSAC FFPMVLVQIP MYNEREVYQL SIGAACRLTW PADRLIVQVL DDSTDAAIKE LVREECSRWA SGGVDVRYEA RKDNAGHKAG NLTEGMRHAY
201: ARRCEFVAIF DAEFQPSSDF LARTVPLLVR DPGIALVQAR WEFVNADECM LTRMQEMSMD YHFKVEQQAG SSLCSFFGYN GSAGVWRREA IEESGGWDDR
301: TTAEDMDLAL RAALLGWEFV YVGDIKVKSE LPSSVRAYRS QQHRWSCGPA LLFKKMLREI LAAERVSAWK KLYIVYNFFV TRRVVSTFFT FFFFSVLLPA
401: KALFPQVRIP AWQMVCVPTA TTLLNSAGTP WRRSAHLVVP WIAFENAMAL HRFKAILIGL FEAGRANEWI VTRKSGNSRP TPPGLKRRRE LHWLELLVGA
501: LLLASGCYDC VHGHGYFYLF ALPQSMMYFA IGFDLLGVHH
101: VEAGGGSSAC FFPMVLVQIP MYNEREVYQL SIGAACRLTW PADRLIVQVL DDSTDAAIKE LVREECSRWA SGGVDVRYEA RKDNAGHKAG NLTEGMRHAY
201: ARRCEFVAIF DAEFQPSSDF LARTVPLLVR DPGIALVQAR WEFVNADECM LTRMQEMSMD YHFKVEQQAG SSLCSFFGYN GSAGVWRREA IEESGGWDDR
301: TTAEDMDLAL RAALLGWEFV YVGDIKVKSE LPSSVRAYRS QQHRWSCGPA LLFKKMLREI LAAERVSAWK KLYIVYNFFV TRRVVSTFFT FFFFSVLLPA
401: KALFPQVRIP AWQMVCVPTA TTLLNSAGTP WRRSAHLVVP WIAFENAMAL HRFKAILIGL FEAGRANEWI VTRKSGNSRP TPPGLKRRRE LHWLELLVGA
501: LLLASGCYDC VHGHGYFYLF ALPQSMMYFA IGFDLLGVHH
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.