Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 66.0 | 13.84 |
| HORVU6Hr1G034630.10 | Barley | plasma membrane | 71.0 | 13.71 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 68.0 | 13.2 |
| HORVU7Hr1G038440.1 | Barley | cytosol, nucleus | 62.0 | 10.9 |
| HORVU3Hr1G107340.2 | Barley | plasma membrane | 55.0 | 10.19 |
| HORVU3Hr1G109930.14 | Barley | plasma membrane | 57.0 | 10.05 |
| HORVU6Hr1G018840.1 | Barley | plastid | 55.0 | 10.04 |
| HORVU2Hr1G028380.1 | Barley | golgi, plasma membrane | 54.0 | 9.93 |
| HORVU4Hr1G000610.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 58.0 | 9.9 |
| HORVU3Hr1G002660.1 | Barley | endoplasmic reticulum, plasma membrane | 54.0 | 9.28 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 49.0 | 7.13 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 46.0 | 7.12 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 49.0 | 7.04 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 49.0 | 7.01 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G037380.1 | EnsemblPlantsGene:HORVU4Hr1G037380 | Gene3D:3.90.550.10 | InterPro:Glyco_trans_2-like | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans |
| PANTHER:PTHR32044 | PANTHER:PTHR32044:SF24 | PFAM:PF13632 | SEG:seg | SUPFAM:SSF53448 | UniParc:UPI000B473C49 |
| UniProt:A0A287NTH6 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:279552369..279554490
Molecular Weight (calculated)
11439.6 Da
IEP (calculated)
6.941
GRAVY (calculated)
-0.099
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MRCRVHLGAA RRPDVSTADM REVLLPRWCS LDYHFKVEQE VSSSFFAFFG FNGTVSVWHI SAVNEAGGWK DWTTAEDMDL AIRASLKGWK FVYLGDVQVH
001: MDGVSPKFVL PETFDGVRME ITGQLGMIWE LVKAPVIVPL LQLAVYICLL MSVMLLCERV YMGIVIVLVK LFWKKPDKRY KFEPIHDDEE LGSSNFPVVL
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS
101: VQIPMFNERE VYKLSIGAAC GLSWPSDRLV IQVLDDSTDP TVKQMVEVEC QRWASKGINI RYQIRENRVG YKAGALKEGL KRSYVKHCEY VVIFDADFQP
201: EPDFLRRSIP FLMHNPNIAL VQARWRFVNS DECLLTRMQE MSLDYHFTVE QEVGSSTHAF FGFNGTAGIW RIAAINEAGG WKDRTTVEDM DLAVRASLRG
301: WKFLYLGDLQ VKSELPSTFR AFRFQQHRWS CGPANLFRKM VMEIVRNKKV RFWKKVYVIY SFFFVRKIIA HWVTFCFYCV VLPLTILVPE VKVPIWGSVY
401: IPSIITILNS VGTPRSIHLL FYWILFENVM SLHRTKATLI GLFEAGRANE WVVTAKLGSG QSAKGNTKGI KRFPRIFKLP DRLNTLELGF AAFLFVCGCY
501: DFVHGKNNYF IYLFLQTMSF FISGLGWIGT YVPS
Arabidopsis Description
CSLA2Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PUD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.