Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 3
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 4
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G504200.1 | Wheat | plasma membrane | 95.41 | 94.58 |
| TraesCS3B01G558400.1 | Wheat | plasma membrane | 95.06 | 94.4 |
| TraesCS3A01G496400.1 | Wheat | plasma membrane | 95.24 | 94.24 |
| HORVU3Hr1G002660.1 | Barley | endoplasmic reticulum, plasma membrane | 87.13 | 84.88 |
| Zm00001d032188_P001 | Maize | plasma membrane | 79.89 | 79.47 |
| Zm00001d050406_P008 | Maize | plasma membrane | 77.78 | 78.33 |
| KXG25219 | Sorghum | plasma membrane | 79.89 | 78.24 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 57.5 | 63.3 |
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 52.56 | 62.47 |
| HORVU6Hr1G034630.10 | Barley | plasma membrane | 56.61 | 61.97 |
| HORVU4Hr1G037380.1 | Barley | cytosol, extracellular, mitochondrion, nucleus | 10.05 | 57.0 |
| HORVU6Hr1G018840.1 | Barley | plastid | 53.79 | 55.66 |
| HORVU7Hr1G038440.1 | Barley | cytosol, nucleus | 54.67 | 54.48 |
| HORVU2Hr1G028380.1 | Barley | golgi, plasma membrane | 48.15 | 50.18 |
| HORVU3Hr1G107340.2 | Barley | plasma membrane | 47.27 | 49.63 |
| HORVU4Hr1G000610.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 49.21 | 47.61 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 37.39 | 32.82 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 38.62 | 31.47 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 37.74 | 31.15 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 37.21 | 30.19 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G109930.14 | EnsemblPlantsGene:HORVU3Hr1G109930 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | PFAM:PF13641 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000B484E79 | UniProt:A0A287MNA9 | MapMan:21.2.3.1.1.1 | : |
Description
No Description!
Coordinates
chrchr3H:-:679612977..679618695
Molecular Weight (calculated)
63737.8 Da
IEP (calculated)
8.225
GRAVY (calculated)
0.231
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGVWAGVW AEVPAVRVDW AAVAAQCAWA GAQARAFLVV PGIRLLVLLS LAMTVMILLE KLFVAAVCYA AKALGHRPER RYQWRPIAAS ACKTGGDEEA
101: GLGGGSAAFP VVLVQIPMYN EREVYKLSIG AACALEWPAD RVVIQVLDDS TDPVVKDLVE IECQRWKGKG VNIKYEVRGN RKGYKAGALK EGLKHDYVHD
201: CEFIAMFDAD FQPESDFLLR TVPFLVHNPD IALVQTRWKF VNSDECLLTR FQEMSLDYHF KFEQEAGSIV YSFFGFNGTA GVWRISAIDD AGGWKDRTTV
301: EDMDLAVRTA LKGWKFVYVG AVKVRSELPS TFKAYRFQQH RWSCGPANLF KKMLIEILEN KKVSFWSKLH LLYDFFFVGK IAAHTVTFIY YCFAIPLSVF
401: FPEIQIPLWG VVYVPTVITL CKALGSPSSF HLVILWVLFE NVMSLHRIKA AVTGLLDAGR VNEWVVTEKL GDANKTKPAM EVLDAVKVID VELTTPLVPK
501: LKKRRIRLWD KYNCSEIFVG TCIIICGFYD VLYANKGYYI YLFIQGLAFL VVGFEYIGTR PPTPSAE
101: GLGGGSAAFP VVLVQIPMYN EREVYKLSIG AACALEWPAD RVVIQVLDDS TDPVVKDLVE IECQRWKGKG VNIKYEVRGN RKGYKAGALK EGLKHDYVHD
201: CEFIAMFDAD FQPESDFLLR TVPFLVHNPD IALVQTRWKF VNSDECLLTR FQEMSLDYHF KFEQEAGSIV YSFFGFNGTA GVWRISAIDD AGGWKDRTTV
301: EDMDLAVRTA LKGWKFVYVG AVKVRSELPS TFKAYRFQQH RWSCGPANLF KKMLIEILEN KKVSFWSKLH LLYDFFFVGK IAAHTVTFIY YCFAIPLSVF
401: FPEIQIPLWG VVYVPTVITL CKALGSPSSF HLVILWVLFE NVMSLHRIKA AVTGLLDAGR VNEWVVTEKL GDANKTKPAM EVLDAVKVID VELTTPLVPK
501: LKKRRIRLWD KYNCSEIFVG TCIIICGFYD VLYANKGYYI YLFIQGLAFL VVGFEYIGTR PPTPSAE
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.