Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G190000.1 | Wheat | plasma membrane | 93.67 | 97.8 |
| TraesCS7B01G093900.1 | Wheat | plasma membrane | 92.97 | 96.71 |
| TraesCS7A01G189100.2 | Wheat | plasma membrane | 93.32 | 96.37 |
| OQU76114 | Sorghum | plasma membrane | 71.18 | 82.65 |
| Zm00001d037235_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 75.92 | 80.0 |
| GSMUA_Achr9P26980_001 | Banana | plasma membrane | 37.61 | 71.57 |
| GSMUA_Achr9P26970_001 | Banana | endoplasmic reticulum, extracellular | 22.32 | 66.84 |
| HORVU7Hr1G092990.4 | Barley | endoplasmic reticulum | 52.37 | 62.47 |
| HORVU4Hr1G037380.1 | Barley | cytosol, extracellular, mitochondrion, nucleus | 10.9 | 62.0 |
| HORVU7Hr1G092910.2 | Barley | plasma membrane | 55.54 | 61.36 |
| HORVU6Hr1G018840.1 | Barley | plastid | 58.17 | 60.4 |
| HORVU6Hr1G034630.10 | Barley | plasma membrane | 54.83 | 60.23 |
| Os06t0230100-00 | Rice | nucleus | 63.44 | 58.41 |
| HORVU2Hr1G028380.1 | Barley | golgi, plasma membrane | 52.55 | 54.96 |
| HORVU3Hr1G109930.14 | Barley | plasma membrane | 54.48 | 54.67 |
| HORVU3Hr1G002660.1 | Barley | endoplasmic reticulum, plasma membrane | 53.25 | 52.06 |
| HORVU3Hr1G107340.2 | Barley | plasma membrane | 46.75 | 49.26 |
| HORVU4Hr1G000610.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 48.33 | 46.93 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 38.14 | 33.59 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 38.31 | 31.32 |
| HORVU1Hr1G067470.1 | Barley | plasma membrane | 37.79 | 31.3 |
| HORVU1Hr1G077230.2 | Barley | plasma membrane | 37.96 | 30.9 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G038440.1 | EnsemblPlantsGene:HORVU7Hr1G038440 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF21 | PFAM:PF13641 | SEG:seg |
| SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000B47923C | UniProt:A0A287W4G8 | MapMan:21.2.3.1.1.1 | : |
Description
No Description!
Coordinates
chrchr7H:+:97677148..97684066
Molecular Weight (calculated)
63695.3 Da
IEP (calculated)
9.086
GRAVY (calculated)
0.076
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: PPLRADAHKK QPQKAERRHA RSRMAGDGEG GAFAAAAKAG WLDGSGGLPL LRWWRASGGG GELLRGWDAV RAGAVAPALA AVSGACLAMS AMLLAEAAFM
101: AAASLVRRRP ERRYSAGPLG ALGDEDEERG LLGFPMVLVQ IPMYNEREVY KLSIGAACGL SWPSDRVIVQ VLDDSTDPTI KDLVELECKI WAKKGKNVKY
201: EVRNNREGYK AGALKEGMLH AYVQQCDFLA VFDADFQPEP DFLVRTIPYL ARNPQIALVQ ARWEFVNPNE CLMTRIQKMT LDYHFKVEQE AGSSTFAFFG
301: FNGTAGVWRI SAIKEAGGWD DRTTVEDMDL AVRAGLKGWK FVYVGDVKVK SELPSNLKAY RRQQHRWTCG AANLFRKMGA EILLTKEVSL WWKLYLLYSF
401: FLVRKVVAHV VPFVLYCVVI PFSVLIPEIK IPAWGVVYIP TAITVLYAVR NPSSIHFIPF WILFENVMSF HRTKATFIGL LELGSVNEWV VTEKLGSASN
501: TKPVPQILER PRCRFWDRWT VSELLFAVFL FVCATYNLVY GSDFYFIYIY LQAITFIIVG TGFCGTSNS
101: AAASLVRRRP ERRYSAGPLG ALGDEDEERG LLGFPMVLVQ IPMYNEREVY KLSIGAACGL SWPSDRVIVQ VLDDSTDPTI KDLVELECKI WAKKGKNVKY
201: EVRNNREGYK AGALKEGMLH AYVQQCDFLA VFDADFQPEP DFLVRTIPYL ARNPQIALVQ ARWEFVNPNE CLMTRIQKMT LDYHFKVEQE AGSSTFAFFG
301: FNGTAGVWRI SAIKEAGGWD DRTTVEDMDL AVRAGLKGWK FVYVGDVKVK SELPSNLKAY RRQQHRWTCG AANLFRKMGA EILLTKEVSL WWKLYLLYSF
401: FLVRKVVAHV VPFVLYCVVI PFSVLIPEIK IPAWGVVYIP TAITVLYAVR NPSSIHFIPF WILFENVMSF HRTKATFIGL LELGSVNEWV VTEKLGSASN
501: TKPVPQILER PRCRFWDRWT VSELLFAVFL FVCATYNLVY GSDFYFIYIY LQAITFIIVG TGFCGTSNS
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.