Factsheet for HORVU3Hr1G074570.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plasma membrane
MultiLoc:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G337100.1	Wheat	plasma membrane	96.7	96.42
TraesCS3D01G302300.1	Wheat	plasma membrane	96.98	95.88
TraesCS3A01G299500.1	Wheat	plasma membrane	96.41	95.31
Os01t0766900-01	Rice	golgi, plasma membrane	23.28	94.19
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	87.79	88.68
Zm00001d012666_P003	Maize	plasma membrane	86.93	87.94
Zm00001d043336_P001	Maize	plasma membrane	84.05	85.65
HORVU1Hr1G077230.2	Barley	plasma membrane	83.05	82.69
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	69.54	77.81
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	62.21	76.37
GSMUA_Achr7P00750_001	Banana	plasma membrane	68.1	75.96
GSMUA_Achr5P01920_001	Banana	plasma membrane	69.97	75.62
GSMUA_Achr4P32270_001	Banana	plasma membrane	69.25	75.55
GSMUA_Achr6P30200_001	Banana	cytosol	66.67	75.2
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	73.28	72.44
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.98	71.67
Bra000635.1-P	Field mustard	plasma membrane	70.55	70.95
CDX83148	Canola	plasma membrane	70.4	70.81
KRH15467	Soybean	plasma membrane	70.83	70.53
KRH52142	Soybean	plasma membrane	71.26	70.25
KRH61452	Soybean	plasma membrane	71.12	69.92
AT4G07960.1	Thale cress	plasma membrane	69.25	68.96
HORVU1Hr1G067470.1	Barley	plasma membrane	67.39	68.27
PGSC0003DMT400030125	Potato	plasma membrane	64.94	67.87
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	66.67	67.44
Solyc04g077470.2.1	Tomato	plasma membrane	69.97	65.63
PGSC0003DMT400012668	Potato	plasma membrane	69.54	65.23
HORVU3Hr1G000340.2	Barley	plasma membrane	57.47	61.92
HORVU4Hr1G037380.1	Barley	cytosol, extracellular, mitochondrion, nucleus	7.04	49.0
HORVU6Hr1G034630.10	Barley	plasma membrane	33.19	44.59
HORVU7Hr1G092910.2	Barley	plasma membrane	32.04	43.3
HORVU7Hr1G092990.4	Barley	endoplasmic reticulum	29.6	43.19
HORVU3Hr1G107340.2	Barley	plasma membrane	31.47	40.56
HORVU2Hr1G028380.1	Barley	golgi, plasma membrane	31.61	40.44
HORVU3Hr1G109930.14	Barley	plasma membrane	31.47	38.62
HORVU7Hr1G038440.1	Barley	cytosol, nucleus	31.32	38.31
HORVU6Hr1G018840.1	Barley	plastid	29.89	37.96
HORVU4Hr1G000610.1	Barley	endoplasmic reticulum, plasma membrane, plastid	31.61	37.54
HORVU3Hr1G002660.1	Barley	endoplasmic reticulum, plasma membrane	30.17	36.08

Protein Annotations

EnsemblPlants:HORVU3Hr1G074570.1	EnsemblPlantsGene:HORVU3Hr1G074570	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF46	PFAM:PF13641	SEG:seg
SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI000B489355	UniProt:A0A287LP59	MapMan:21.2.1.1.1	:

Description

No Description!

Coordinates

chrchr3H:+:558854506..558859311

Molecular Weight (calculated)

77335.9 Da

IEP (calculated)

8.394

GRAVY (calculated)

0.055

Length

696 amino acids

Sequence
(BLAST)

001: MAPWWGQEAR GGASGGMTGT PVVVKMQTPD WAISEVPPLP GSPAAGGKDG RGKNARQITW VLLLKAHRAA GKLTGAATAA LSVAAAARRR VAAGRTDSDS
101: DAANANAPPG GSPARLLGVL RAFLLLSVLL LAADVAAHAQ GWHLAALPDL EAVEGLFAAG YAAWMRARAA YLGPALQFLT NACVVLFMIQ SADRLILCLG
201: CFWIKLRGIK PVANAAAAGK DDVEAGAQEE EFPMVLVQIP MCNEKEVYQQ SIGAVCNLDW PRSNFLVQVL DDSDDAATSA LIREEVEKWQ REGVRILYRH
301: RVIRDGYKAG NLKSAMNCSY VKDYEFVVIF DADFQPQEDF LKRTVPHFKG KEDVGLVQAR WSFVNKDENL LTRLQNINLC FHFEVEQQVN GAFLNFFGFN
401: GTAGVWRIKA LEDSGGWMER TTVEDMDIAV RAHLKGWKFL YLNDVECQCE LPESYEAYRK QQHRWHSGPM QLFRLCFVDI IKSKIGFWKK FNLIFLFFLL
501: RKLILPFYSF TLFCVILPMT MFAPEAELPA WVVCYIPATM SLLNILPAPK SFPFIVPYLL FENTMSVTKF NAMISGLFQL GSAYEWVVTK KSGRSSEGDL
601: VALVENEKPS KQQRVGSAPN LDSLAAKEEL YPKADPKPKK KKHNRLYRKE LALSFLLLTA AARSLLSVQG IHFYFLLFQG VSFLVVGLDL IGEQVE

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.