Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G337100.1 | Wheat | plasma membrane | 97.73 | 98.57 |
| TraesCS3D01G302300.1 | Wheat | plasma membrane | 98.01 | 98.01 |
| HORVU3Hr1G074570.1 | Barley | plasma membrane | 95.31 | 96.41 |
| Os01t0766900-01 | Rice | golgi, plasma membrane | 23.01 | 94.19 |
| KXG33450 | Sorghum | mitochondrion, peroxisome, plasma membrane | 87.36 | 89.26 |
| Zm00001d012666_P003 | Maize | plasma membrane | 87.07 | 89.1 |
| Zm00001d043336_P001 | Maize | plasma membrane | 84.09 | 86.68 |
| TraesCS1A01G331800.1 | Wheat | plasma membrane | 81.96 | 82.19 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 68.75 | 77.81 |
| CDY34018 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 61.65 | 76.54 |
| GSMUA_Achr7P00750_001 | Banana | plasma membrane | 67.47 | 76.12 |
| GSMUA_Achr5P01920_001 | Banana | plasma membrane | 69.46 | 75.93 |
| GSMUA_Achr4P32270_001 | Banana | plasma membrane | 68.75 | 75.86 |
| GSMUA_Achr6P30200_001 | Banana | cytosol | 66.05 | 75.36 |
| TraesCS5A01G405700.1 | Wheat | mitochondrion | 73.86 | 73.97 |
| GSMUA_Achr4P23120_001 | Banana | cytosol, peroxisome, plasma membrane | 72.59 | 72.59 |
| VIT_18s0001g08580.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 71.31 | 71.82 |
| KRH15467 | Soybean | plasma membrane | 70.6 | 71.1 |
| Bra000635.1-P | Field mustard | plasma membrane | 69.6 | 70.81 |
| CDX83148 | Canola | plasma membrane | 69.6 | 70.81 |
| KRH52142 | Soybean | plasma membrane | 70.88 | 70.68 |
| KRH61452 | Soybean | plasma membrane | 70.6 | 70.2 |
| AT4G07960.1 | Thale cress | plasma membrane | 68.47 | 68.96 |
| TraesCS1A01G312600.1 | Wheat | mitochondrion, plasma membrane | 66.9 | 68.26 |
| PGSC0003DMT400030125 | Potato | plasma membrane | 64.2 | 67.87 |
| Solyc12g088240.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 66.05 | 67.59 |
| Solyc04g077470.2.1 | Tomato | plasma membrane | 68.75 | 65.23 |
| PGSC0003DMT400012668 | Potato | plasma membrane | 68.32 | 64.82 |
| TraesCS6A01G169200.1 | Wheat | plasma membrane | 32.95 | 44.79 |
| TraesCS1A01G010500.1 | Wheat | extracellular, plasma membrane | 26.7 | 44.24 |
| TraesCS7A01G394100.1 | Wheat | plasma membrane | 32.39 | 44.02 |
| TraesCS7A01G394000.1 | Wheat | plasma membrane | 32.24 | 43.82 |
| TraesCS7A01G393800.1 | Wheat | plasma membrane | 31.53 | 43.11 |
| TraesCS2A01G530900.1 | Wheat | golgi | 31.82 | 42.5 |
| TraesCS6A01G105800.1 | Wheat | plasma membrane, plastid | 30.4 | 40.53 |
| TraesCS7A01G189100.2 | Wheat | plasma membrane | 30.54 | 39.02 |
| TraesCS2A01G157100.3 | Wheat | plasma membrane | 31.96 | 38.79 |
| TraesCS2A01G157200.2 | Wheat | plasma membrane | 31.68 | 38.51 |
| TraesCS3A01G496400.1 | Wheat | plasma membrane | 31.25 | 38.39 |
| TraesCS3A01G019200.1 | Wheat | plasma membrane | 29.69 | 37.06 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G299500.1 | EnsemblPlantsGene:TraesCS3A01G299500 | Gene3D:3.90.550.10 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 |
| PANTHER:PTHR32044:SF46 | PFAM:PF13641 | SEG:seg | SUPFAM:SSF53448 | TMHMM:TMhelix | MapMan:21.2.1.1.1 |
Description
No Description!
Coordinates
chr3A:+:533658326..533662665
Molecular Weight (calculated)
78228.7 Da
IEP (calculated)
8.009
GRAVY (calculated)
0.023
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPWWGQEAR GGVSGGVTGT PVVVKMQTPD WAISEVPPPG SPAAGGKDGR GKNARQITWV LLLKAHRAAG KLTGAATAAL SVAAAARRRV AAGRTDSDAD
101: ADGAPPGPGA GRPALRTRLY GFIRASLLLS LLLLAADVAA HAQGWHLAAL PDLEAVEGLF AAGYAAWMRA RAAYLGPALQ FLTNACVVLF MIQSADRLIL
201: CLGCFWIKLR GIRPVPNAAT AGNGKGSDDV EAGAQEEEEG EFPMVLVQIP MCNEKEVYQQ SIGAVCNLDW PRSNFLVQVL DDSDDAATSA LIREEVEKWQ
301: REGVRILYRH RVIRDGYKAG NLKSAMNCSY VKDYEFVVIF DADFQPQEDF LKLTVPHFKG KEDVGLVQAR WSFVNKDENL LTRLQNINLC FHFEVEQQVN
401: GAFLNFFGFN GTAGVWRIKA LEDSGGWMER TTVEDMDIAV RAHLKGWKFL YLNDVECQCE LPESYEAYRK QQHRWHSGPM QLFRLCFVDI IKSKIGFWKK
501: FNLIFLFFLL RKLILPFYSF TLFCVILPMT MFAPEAELPA WVVCYIPATM SLLNILPAPK SFPFIVPYLL FENTMSVTKF NAMISGLFQL GSAYEWVVTK
601: KSGRSSEGDL VALVENEKQS KQQRVGSAPN LDSLAAKEEL YPKSEPKKKK HNRLYRKELA LSFLLLTAAA RSLLSVQGIH FYFLLFQGVS FLVVGLDLIG
701: EQVE
101: ADGAPPGPGA GRPALRTRLY GFIRASLLLS LLLLAADVAA HAQGWHLAAL PDLEAVEGLF AAGYAAWMRA RAAYLGPALQ FLTNACVVLF MIQSADRLIL
201: CLGCFWIKLR GIRPVPNAAT AGNGKGSDDV EAGAQEEEEG EFPMVLVQIP MCNEKEVYQQ SIGAVCNLDW PRSNFLVQVL DDSDDAATSA LIREEVEKWQ
301: REGVRILYRH RVIRDGYKAG NLKSAMNCSY VKDYEFVVIF DADFQPQEDF LKLTVPHFKG KEDVGLVQAR WSFVNKDENL LTRLQNINLC FHFEVEQQVN
401: GAFLNFFGFN GTAGVWRIKA LEDSGGWMER TTVEDMDIAV RAHLKGWKFL YLNDVECQCE LPESYEAYRK QQHRWHSGPM QLFRLCFVDI IKSKIGFWKK
501: FNLIFLFFLL RKLILPFYSF TLFCVILPMT MFAPEAELPA WVVCYIPATM SLLNILPAPK SFPFIVPYLL FENTMSVTKF NAMISGLFQL GSAYEWVVTK
601: KSGRSSEGDL VALVENEKQS KQQRVGSAPN LDSLAAKEEL YPKSEPKKKK HNRLYRKELA LSFLLLTAAA RSLLSVQGIH FYFLLFQGVS FLVVGLDLIG
701: EQVE
001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
Arabidopsis Description
CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.