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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G334400.1 Wheat plasma membrane 99.29 99.29
TraesCS1B01G345400.1 Wheat plasma membrane 99.15 99.15
HORVU1Hr1G077230.2 Barley plasma membrane 97.86 98.28
Os05t0510800-01 Rice plasma membrane 87.18 88.95
KXG22328 Sorghum plasma membrane 87.89 88.52
Zm00001d038676_P001 Maize plasma membrane 85.19 85.19
TraesCS3A01G299500.1 Wheat plasma membrane 82.19 81.96
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 68.52 77.33
GSMUA_Achr7P00750_001 Banana plasma membrane 68.23 76.76
GSMUA_Achr4P32270_001 Banana plasma membrane 69.23 76.18
GSMUA_Achr6P30200_001 Banana cytosol 66.67 75.85
GSMUA_Achr5P01920_001 Banana plasma membrane 69.23 75.47
CDY34018 Canola cytosol, endoplasmic reticulum, plasma membrane 60.26 74.6
GSMUA_Achr4P23120_001 Banana cytosol, peroxisome, plasma membrane 72.65 72.44
TraesCS5A01G405700.1 Wheat mitochondrion 72.22 72.12
VIT_18s0001g08580.t01 Wine grape cytosol, peroxisome, plasma membrane 71.08 71.39
KRH15467 Soybean plasma membrane 70.51 70.82
Bra000635.1-P Field mustard plasma membrane 69.09 70.09
CDX83148 Canola plasma membrane 68.95 69.94
KRH61452 Soybean plasma membrane 70.09 69.49
KRH52142 Soybean plasma membrane 69.8 69.41
AT4G07960.1 Thale cress plasma membrane 68.8 69.1
PGSC0003DMT400030125 Potato plasma membrane 65.38 68.92
Solyc12g088240.1.1 Tomato cytosol, peroxisome, plasma membrane 67.24 68.6
TraesCS1A01G312600.1 Wheat mitochondrion, plasma membrane 67.09 68.26
PGSC0003DMT400012668 Potato plasma membrane 68.8 65.09
Solyc04g077470.2.1 Tomato plasma membrane 68.66 64.96
TraesCS6A01G169200.1 Wheat plasma membrane 32.34 43.82
TraesCS7A01G393800.1 Wheat plasma membrane 31.91 43.5
TraesCS1A01G010500.1 Wheat extracellular, plasma membrane 26.21 43.29
TraesCS7A01G394100.1 Wheat plasma membrane 31.91 43.24
TraesCS7A01G394000.1 Wheat plasma membrane 31.77 43.05
TraesCS2A01G530900.1 Wheat golgi 30.63 40.8
TraesCS6A01G105800.1 Wheat plasma membrane, plastid 29.77 39.58
TraesCS2A01G157200.2 Wheat plasma membrane 32.19 39.03
TraesCS2A01G157100.3 Wheat plasma membrane 32.19 38.97
TraesCS7A01G189100.2 Wheat plasma membrane 30.2 38.48
TraesCS3A01G496400.1 Wheat plasma membrane 30.34 37.17
TraesCS3A01G019200.1 Wheat plasma membrane 29.34 36.52
Protein Annotations
EnsemblPlants:TraesCS1A01G331800.1EnsemblPlantsGene:TraesCS1A01G331800Gene3D:3.90.550.10InterPro:IPR029044InterPro:Nucleotide-diphossugar_transPANTHER:PTHR32044
PANTHER:PTHR32044:SF16PFAM:PF13641SEG:segSUPFAM:SSF53448TMHMM:TMhelixMapMan:21.2.1.1.1
Description
No Description!
Coordinates
chr1A:+:520570276..520573708
Molecular Weight (calculated)
78501.8 Da
IEP (calculated)
8.301
GRAVY (calculated)
0.066
Length
702 amino acids
Sequence
(BLAST)
001: MAPSFWGREA RLSDGGGGTP VVVKMENPNW SISEMEQEPV PGSPAGLAAG KAGRGKNARQ ITWVLLLKAH RAAGRLTGAA SAALAVAAAA RRRVAAGRTD
101: GDAAPGESTA LRARFYGCLR VFVVLSMLLL AVEVAAYLQG WHLQMPQMPE MPGQLAMDGL LAVDGLAAAA YAGWMRVRLQ YIAPPLQFLT NSCVVLFMIQ
201: SVDRLVLCLG CLWIKLRGIK PVPIAADKDD VEAGDEDFPM VLVQMPMCNE REVYQQSIGA ICALDWPRSN FLVQVLDDSD DATTSALIKE EVEKWQREGV
301: RIVYRHRVIR DGYKAGNLKS AMNCSYVKDY EYVVIFDADF QPQADFLKRA MPHFKGKDDV GLVQARWSFV NNDENLLTRL QNINLCFHFE VEQQVNGAFL
401: NFFGFNGTAG VWRIKALEDS GGWMERTTVE DMDIAVRAHL KGWKFLYLND VECQCELPES YEAYRKQQHR WHSGPMQLFR LCFVDIIKSK IGFWKKCNLI
501: FLFFLLRKLI LPFYSFTLFC VILPMTMFVP EAELPAWVVC YIPATMSIMS ILPSPKSFPF IVPYLLFENT MSVTKFNAMI SGLFQLGSAY EWVVTKKSGR
601: SSEGDLVALV EKHTAQQQQR VGSAPDLAGL AAKDSSLPKK DAPKKKQKHN RIYRKELALS FLLLTAAARS VLSAQGIHFY FLLFQGVSFL VMGLDLIGEQ
701: VE
Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)
001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE
Arabidopsis Description
CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.