Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G054500.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.26 | 94.36 |
| TraesCS3D01G027600.1 | Wheat | plasma membrane | 94.15 | 93.16 |
| TraesCS3D01G015000.1 | Wheat | plasma membrane | 93.26 | 92.61 |
| TraesCSU01G046600.1 | Wheat | plasma membrane | 93.44 | 92.46 |
| HORVU3Hr1G002660.1 | Barley | endoplasmic reticulum, plasma membrane | 89.72 | 86.94 |
| TraesCS3A01G496400.1 | Wheat | plasma membrane | 87.77 | 86.39 |
| Zm00001d032188_P001 | Maize | plasma membrane | 76.95 | 76.14 |
| KXG25219 | Sorghum | plasma membrane | 77.48 | 75.47 |
| Zm00001d050406_P008 | Maize | plasma membrane | 74.82 | 74.96 |
| TraesCS7A01G394000.1 | Wheat | plasma membrane | 56.03 | 61.0 |
| TraesCS6A01G169200.1 | Wheat | plasma membrane | 55.67 | 60.62 |
| TraesCS7A01G394100.1 | Wheat | plasma membrane | 55.67 | 60.62 |
| TraesCS7A01G393800.1 | Wheat | plasma membrane | 54.79 | 60.0 |
| TraesCS1A01G010500.1 | Wheat | extracellular, plasma membrane | 42.55 | 56.47 |
| TraesCS6A01G105800.1 | Wheat | plasma membrane, plastid | 51.77 | 55.3 |
| TraesCS7A01G189100.2 | Wheat | plasma membrane | 51.95 | 53.18 |
| TraesCS2A01G530900.1 | Wheat | golgi | 48.4 | 51.8 |
| TraesCS2A01G157100.3 | Wheat | plasma membrane | 47.16 | 45.86 |
| TraesCS2A01G157200.2 | Wheat | plasma membrane | 46.45 | 45.25 |
| TraesCS3A01G299500.1 | Wheat | plasma membrane | 37.06 | 29.69 |
| TraesCS1A01G312600.1 | Wheat | mitochondrion, plasma membrane | 36.17 | 29.57 |
| TraesCS1A01G331800.1 | Wheat | plasma membrane | 36.52 | 29.34 |
| TraesCS5A01G405700.1 | Wheat | mitochondrion | 35.46 | 28.45 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G019200.1 | EnsemblPlantsGene:TraesCS3A01G019200 | Gene3D:3.90.550.10 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 |
| PANTHER:PTHR32044:SF21 | PFAM:PF13641 | SEG:seg | SUPFAM:SSF53448 | TIGR:cd06437 | TMHMM:TMhelix |
| MapMan:21.2.3.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:11758247..11762245
Molecular Weight (calculated)
64045.1 Da
IEP (calculated)
7.546
GRAVY (calculated)
0.214
Length
564 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAWLWVE VPVRVDWPAV AAQCAWAGEQ ARAFLVVPAV RLLVLLSLAM TVMILLEKLF VAAVCYAAKA FGHRPESRYQ WRPIAASACK TGGDDEEDGI
101: VVVGSAAFPV VLVQIPMYNE REVYKVSIGA ACALEWPSDR MVIQVLDDST DPVVKDLVKI ECQRWKSKGV NIRYEVRQNR KGYKAGALKE GLMRDYVREC
201: EFIAMFDADF QPESDFLLRT VPFLVHNPDI ALVQTRWKFV NSDECLLTRF QEMSLDYHFK FEQEAGSIVY SFFGFNGTAG VWRISAINDA GGWKERTTVE
301: DMDLAVRTAL LGLKFVYVGA VKVKSELPST FKAYRFQQHR WSCGPANLFK KVLVEILHNK KVSFWCKLHL LYDFFFVGKI TAHTVTFIYY CFAIPVSVFF
401: PEIQIPLWCV VYVPTVITLC KALGSPSSFH LVILWVLFDN VMSLHRIKAT ITGLLDARRV NEWVVTEKLG DANKTEPAVE GLNDVQVIDV ELSTPLVPKL
501: EKRRTRLWDK YNCSEIFVGT CIIICGCYDV LYANKGYYIY LFIQGLAFLV IGFEYIGTRP PNTE
101: VVVGSAAFPV VLVQIPMYNE REVYKVSIGA ACALEWPSDR MVIQVLDDST DPVVKDLVKI ECQRWKSKGV NIRYEVRQNR KGYKAGALKE GLMRDYVREC
201: EFIAMFDADF QPESDFLLRT VPFLVHNPDI ALVQTRWKFV NSDECLLTRF QEMSLDYHFK FEQEAGSIVY SFFGFNGTAG VWRISAINDA GGWKERTTVE
301: DMDLAVRTAL LGLKFVYVGA VKVKSELPST FKAYRFQQHR WSCGPANLFK KVLVEILHNK KVSFWCKLHL LYDFFFVGKI TAHTVTFIYY CFAIPVSVFF
401: PEIQIPLWCV VYVPTVITLC KALGSPSSFH LVILWVLFDN VMSLHRIKAT ITGLLDARRV NEWVVTEKLG DANKTEPAVE GLNDVQVIDV ELSTPLVPKL
501: EKRRTRLWDK YNCSEIFVGT CIIICGCYDV LYANKGYYIY LFIQGLAFLV IGFEYIGTRP PNTE
001: MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
101: VHKWEPINDD DLELANTNYP MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG INIMSEIRDN RIGYKAGALK
201: AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE
301: AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW RKMTMEILQN KKVSAWKKLY LIYNFFFIRK IVVHIFTFVF
401: YCLILPTTVL FPELQVPKWA TVYFPTTITI LNAIATPRSL HLLVFWILFE NVMSMHRTKA TFIGLLEAGR VNEWVVTEKL GDTLKSKLIG KATTKLYTRF
501: GQRLNWRELV VGLYIFFCGC YDFAYGGSYF YVYLFLQSCA FFVAGVGYIG TFVPTV
Arabidopsis Description
CSLA3Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q7B4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.