Factsheet for TraesCS1A01G312600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G312700.1	Wheat	plasma membrane	95.51	95.51
TraesCS1B01G324200.1	Wheat	mitochondrion	93.77	93.77
HORVU1Hr1G067470.1	Barley	plasma membrane	87.68	88.06
Os07t0124750-00	Rice	plasma membrane	81.45	78.6
GSMUA_Achr7P00750_001	Banana	plasma membrane	69.71	77.08
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	68.84	76.37
GSMUA_Achr4P32270_001	Banana	plasma membrane	70.43	76.18
KXG34323	Sorghum	plasma membrane	75.22	76.1
TraesCS5A01G405700.1	Wheat	mitochondrion	77.1	75.68
GSMUA_Achr5P01920_001	Banana	plasma membrane	70.29	75.31
GSMUA_Achr6P30200_001	Banana	cytosol	65.65	73.42
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	59.42	72.31
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	71.01	69.6
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.29	69.38
KRH15467	Soybean	plasma membrane	68.84	67.95
CDX83148	Canola	plasma membrane	68.12	67.92
Bra000635.1-P	Field mustard	plasma membrane	67.97	67.77
KRH52142	Soybean	plasma membrane	68.99	67.42
KRH61452	Soybean	plasma membrane	69.13	67.37
AT4G07960.1	Thale cress	plasma membrane	67.97	67.1
TraesCS1A01G331800.1	Wheat	plasma membrane	68.26	67.09
TraesCS3A01G299500.1	Wheat	plasma membrane	68.26	66.9
PGSC0003DMT400030125	Potato	plasma membrane	64.06	66.37
Solyc12g088240.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.36	65.55
Solyc04g077470.2.1	Tomato	plasma membrane	67.25	62.53
PGSC0003DMT400012668	Potato	plasma membrane	67.25	62.53
TraesCS6A01G169200.1	Wheat	plasma membrane	33.77	44.98
TraesCS7A01G393800.1	Wheat	plasma membrane	33.19	44.47
TraesCS7A01G394000.1	Wheat	plasma membrane	32.9	43.82
TraesCS7A01G394100.1	Wheat	plasma membrane	32.9	43.82
TraesCS1A01G010500.1	Wheat	extracellular, plasma membrane	26.52	43.06
TraesCS2A01G530900.1	Wheat	golgi	31.01	40.61
TraesCS7A01G189100.2	Wheat	plasma membrane	31.59	39.56
TraesCS6A01G105800.1	Wheat	plasma membrane, plastid	30.0	39.2
TraesCS2A01G157100.3	Wheat	plasma membrane	32.75	38.97
TraesCS2A01G157200.2	Wheat	plasma membrane	32.32	38.51
TraesCS3A01G496400.1	Wheat	plasma membrane	31.3	37.7
TraesCS3A01G019200.1	Wheat	plasma membrane	29.57	36.17

Protein Annotations

EnsemblPlants:TraesCS1A01G312600.1	EnsemblPlantsGene:TraesCS1A01G312600	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044
PANTHER:PTHR32044:SF47	PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chr1A:+:504578903..504581605

Molecular Weight (calculated)

78675.9 Da

IEP (calculated)

9.040

GRAVY (calculated)

0.036

Length

690 amino acids

Sequence
(BLAST)

001: MAPWNNLWAG RAAIAGSNAY RDMPVIVKME NPNWSISEIN GGSDNGEDFL ARVGGQRRRV KNTKQITWVF RLKAHRAAGC LAWLTSAVVA LGDAARRRVV
101: AGRTDSDATD GECEDVAERA PTSRRSRFYT LIKACLMMSI FLLVVELAAY SNGKGNLVVF INSFNASWIR FRAAYVAPPL QLLADACVVL FLVQSVDRLF
201: QSLGCFYILI KRIKPKPLSP ALSDAEDPNV GYYPMVLVQI PMCNEKEVYQ QSIAAVCNLD WPRSNFLVQV LDDSDDVATQ ALIKDEVEKW RHSGAHIVYR
301: HRVLREGYKA GNLKSAMSCS YVKDYEYVAI FDADFQPYPD FLKRTVPHFK DNEDLGLVQA RWSFVNKDEN LLTRLQNINL CFHFEVEQQV NGVFINFFGF
401: NGTAGVWRIK AVEDSGGWME RTTVEDMDIA VRAHLKGWKF VFLNDVECQC ELPESYEAYR KQQHRWHSGP MQLFRLCLPD IIRCKIVFWK KANLIFLFFL
501: LRKLILPFYS FTLFCIILPM TMFVPEAELP NWVVCYIPVL MSFLNIVPTP KSFPFIIPYL LFENTMSVTK FNAMISGLFQ LGSTYEWVVT KKSGRSLEGD
601: LISLAPKGLE QLKYRSVPAI NLAIKEQSKA KKESKKYNRI YKKELAMSLL LLSAAARSLL SKQGIHFYFL LFQGISFLLV GLDLIGQDIK

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.