Factsheet for PGSC0003DMT400012668

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 2
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g077470.2.1	Tomato	plasma membrane	97.98	97.98
PGSC0003DMT400030125	Potato	plasma membrane	76.01	84.68
VIT_18s0001g08580.t01	Wine grape	cytosol, peroxisome, plasma membrane	77.63	82.4
CDY34018	Canola	cytosol, endoplasmic reticulum, plasma membrane	62.4	81.66
AT4G07960.1	Thale cress	plasma membrane	74.53	79.11
KRH15467	Soybean	plasma membrane	74.26	78.83
Bra000635.1-P	Field mustard	plasma membrane	73.32	78.61
KRH61452	Soybean	plasma membrane	74.93	78.53
Os01t0766900-01	Rice	golgi, plasma membrane	18.19	78.49
CDX83148	Canola	plasma membrane	73.18	78.47
KRH52142	Soybean	plasma membrane	74.53	78.33
GSMUA_Achr7P00750_001	Banana	plasma membrane	65.36	77.72
GSMUA_Achr6P30200_001	Banana	cytosol	64.29	77.31
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	64.69	77.17
GSMUA_Achr5P01920_001	Banana	plasma membrane	66.71	76.86
GSMUA_Achr4P32270_001	Banana	plasma membrane	65.23	75.86
Os03t0770800-01	Rice	plasma membrane	59.03	73.49
GSMUA_Achr4P23120_001	Banana	cytosol, peroxisome, plasma membrane	69.54	73.3
EER90820	Sorghum	plasma membrane	67.25	72.11
Os05t0510800-01	Rice	plasma membrane	66.71	71.95
KXG33450	Sorghum	mitochondrion, peroxisome, plasma membrane	66.58	71.7
KXG22328	Sorghum	plasma membrane	67.12	71.45
Zm00001d012666_P003	Maize	plasma membrane	66.04	71.22
Zm00001d043336_P001	Maize	plasma membrane	65.09	70.72
TraesCS5A01G405700.1	Wheat	mitochondrion	66.98	70.7
Zm00001d034205_P001	Maize	plasma membrane	67.52	70.66
Zm00001d013168_P001	Maize	plasma membrane	65.23	70.55
Zm00001d038676_P001	Maize	plasma membrane	66.31	70.09
TraesCS5B01G410400.1	Wheat	mitochondrion	67.12	69.94
PGSC0003DMT400053633	Potato	endoplasmic reticulum, plasma membrane, vacuole	16.58	69.89
HORVU3Hr1G074570.1	Barley	plasma membrane	65.23	69.54
HORVU1Hr1G077230.2	Barley	plasma membrane	65.09	69.1
TraesCS1D01G334400.1	Wheat	plasma membrane	65.09	68.8
TraesCS1A01G331800.1	Wheat	plasma membrane	65.09	68.8
TraesCS3B01G337100.1	Wheat	plasma membrane	64.56	68.62
TraesCS1B01G345400.1	Wheat	plasma membrane	64.82	68.52
TraesCS3A01G299500.1	Wheat	plasma membrane	64.82	68.32
TraesCS3D01G302300.1	Wheat	plasma membrane	64.69	68.18
HORVU1Hr1G067470.1	Barley	plasma membrane	62.8	67.83
TraesCS5D01G415700.1	Wheat	mitochondrion	67.25	67.8
Os07t0124750-00	Rice	plasma membrane	65.09	67.55
TraesCS1D01G312700.1	Wheat	plasma membrane	62.8	67.54
TraesCS1A01G312600.1	Wheat	mitochondrion, plasma membrane	62.53	67.25
TraesCS1B01G324200.1	Wheat	mitochondrion	62.26	66.96
PGSC0003DMT400026046	Potato	plasma membrane	58.76	66.67
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	61.46	65.71
KXG34323	Sorghum	plasma membrane	60.24	65.54
PGSC0003DMT400095504	Potato	plasma membrane	37.6	55.69
PGSC0003DMT400060105	Potato	cytosol	28.44	48.84
PGSC0003DMT400070323	Potato	plasma membrane, plastid	32.34	45.28
PGSC0003DMT400007050	Potato	mitochondrion	31.81	44.28
PGSC0003DMT400068221	Potato	plasma membrane	31.0	43.89
PGSC0003DMT400072644	Potato	plasma membrane	31.4	43.71
PGSC0003DMT400018425	Potato	plasma membrane	31.4	43.71
PGSC0003DMT400009922	Potato	plasma membrane	12.94	39.51

Protein Annotations

EnsemblPlants:PGSC0003DMT400012668	EnsemblPlantsGene:PGSC0003DMG400004943	EntrezGene:102580102	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	ncoils:Coil	PANTHER:PTHR32044	PANTHER:PTHR32044:SF45
PFAM:PF13641	PGSC:PGSC0003DMG400004943	RefSeq:XP_006356832.1	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix
UniParc:UPI000295A1DC	UniProt:M1A1L4	MapMan:21.2.1.1.1	:	:	:

Description

Transferase, transferring glycosyl groups [Source:PGSC_GENE;Acc:PGSC0003DMG400004943]

Coordinates

chr4:+:66548788..66552388

Molecular Weight (calculated)

84983.0 Da

IEP (calculated)

8.227

GRAVY (calculated)

-0.067

Length

742 amino acids

Sequence
(BLAST)

001: MAPSFTWWGK ETHRGTPVVV KMENPNNWSM VELEGPSEDD FLLPNDDVSS MSPYKREKVR NKNAKQLTWV LLLKAHKAAG CLTSIASALF SLASVVRRRV
101: AAGRTDSTDN SSTENPAVKN RFYTCIKIFL WLSVILLGFE IAAYFKGWYF SATDLQLQYL YSLDFHTFAN PLAVQSVFDW FYSKWVLIRV EYLAPPLQFL
201: ANGCIVLFLI QSVDRLVLCL GCLWVKMKKI KPIAKEGAMD LESGDGSGYY PMVLVQIPMC NEKEVYQQSI GAVCCLEWPK SRLLIQVLDD SDDPITQTLI
301: NEEVRKWQKE GANIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVTIFDA DFQPMPDFLK RTVPYFKDNE DIGLVQARWS FVNKDENLLT RLQHVNLAFH
401: FEVEQQVNGI FLNFFGFNGT AGVWRIKALE ESGGWLERTT VEDMDIAVRA HLHGWKFIFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRVCLPAIIK
501: SKISIWKKGN LIFLFFLLRK LILPFYSFTL FCIILPMTMF IPEATLPSWV VSYVPATMSF LNILPSPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS
601: AYEWVVTKKS GRSSEGDLAS LAEEKPKHQR VASEEWTATK KSGHSSEGDL TLLVDGKPKH QRGVSVPDLE ELREEIKEKE KKASRKKKHN RIYTKELALA
701: FLLLTASLRS LLSAQGIHFY FLLFQGISFL LVGLDLIGEQ VD

Best Arabidopsis Sequence Match ( AT4G07960.1 )
(BLAST)

001: MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD
101: IEISSSGVGS LQKQNHTKKS KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE YLAPPLQFLA NGCIVLFLVQ
201: SLDRLILCLG CFWIRFKKIK PVPKPDSISD LESGDNGAFL PMVLVQIPMC NEKEVYQQSI AAVCNLDWPK GKILIQILDD SDDPITQSLI KEEVHKWQKL
301: GARIVYRHRV NREGYKAGNL KSAMNCSYVK DYEFVAIFDA DFQPLPDFLK KTIPHFKDNE EIGLVQARWS FVNKEENLLT RLQNINLAFH FEVEQQVNSV
401: FLNFFGFNGT AGVWRIKALE DSGGWLERTT VEDMDIAVRA HLHGWKFVFL NDVECQCELP ESYEAYRKQQ HRWHSGPMQL FRLCLPAVIK SKISIGKKFN
501: LIFLFFLLRK LILPFYSFTL FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA MVSGLFQLGS AYEWVVTKKS
601: GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

Arabidopsis Description

CSLC12CSLC12 [Source:UniProtKB/TrEMBL;Acc:A0A178UW53]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.