Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
- peroxisome 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
PGSC0003DMT400006495 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G07330.1 | PGSC0003DMT400006495 | AT3G16310.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc09g057640.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 86.23 | 62.97 |
GSMUA_Achr6P27800_001 | Banana | plasma membrane | 63.87 | 49.54 |
AT3G07330.1 | Thale cress | cytosol, peroxisome, plasma membrane | 67.27 | 49.41 |
VIT_00s0580g00010.t01 | Wine grape | plasma membrane, plastid | 72.26 | 48.07 |
Bra001246.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 67.07 | 48.07 |
CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 48.06 |
CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 66.87 | 47.93 |
KRH07420 | Soybean | plasma membrane | 66.27 | 47.56 |
KRH66156 | Soybean | endoplasmic reticulum | 66.27 | 46.96 |
PGSC0003DMT400024646 | Potato | golgi, peroxisome, plasma membrane | 57.68 | 41.64 |
PGSC0003DMT400026046 | Potato | plasma membrane | 54.09 | 41.44 |
PGSC0003DMT400030125 | Potato | plasma membrane | 52.89 | 39.79 |
PGSC0003DMT400012668 | Potato | plasma membrane | 55.69 | 37.6 |
PGSC0003DMT400060105 | Potato | cytosol | 26.55 | 30.79 |
PGSC0003DMT400072644 | Potato | plasma membrane | 31.94 | 30.02 |
PGSC0003DMT400007050 | Potato | mitochondrion | 31.94 | 30.02 |
PGSC0003DMT400018425 | Potato | plasma membrane | 30.94 | 29.08 |
PGSC0003DMT400070323 | Potato | plasma membrane, plastid | 30.54 | 28.87 |
PGSC0003DMT400068221 | Potato | plasma membrane | 29.94 | 28.63 |
PGSC0003DMT400009922 | Potato | plasma membrane | 6.19 | 12.76 |
PGSC0003DMT400053633 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 1.8 | 5.11 |
Zm00001d010955_P001 | Maize | extracellular | 1.0 | 2.7 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400095504 | EnsemblPlantsGene:PGSC0003DMG400045075 | Gene3D:3.90.550.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF14 | PFAM:PF13641 | PGSC:PGSC0003DMG400045075 |
SEG:seg | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000295CA57 | UniProt:M1DWG2 | MapMan:50.2.4 |
Description
Xyloglucan glycosyltransferase 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400045075]
Coordinates
chr9:-:32090614..32094115
Molecular Weight (calculated)
58107.7 Da
IEP (calculated)
6.823
GRAVY (calculated)
-0.140
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRPPNQEFQ EWWNKQQSAN GSEDLFPSSS ENSRFLTVEI SSPTVAEKER TRSARQLSWI YLLKFQQIAN SIAFLTSGFI SIVCTANRRI VTSNSAHPRS
101: DSRRYRVIKV FLTVSVILLV FELVAYFRGW HFSPLTVESA SAEVLDLAEY VYANWLDIRA NYLAPPLQSL ISMCIVLFLI QSVDRVVLVL GCFWIKFRGL
201: KPLAEIDYSS DVENLNAEYY PMVLLQIPMC NEREFIHFCR TSLLKAKCRA VCVQDWPKDR MLVQILDDSD DLGVQGLIKA EVQKWQQRGV HIIYRHCLIR
301: TGYKAGNLKS AMSCDYVKNY EFVAIFDADF QPTPDFLKNT VPYFKGHDDV ALVQTRWAFV NKDENLVTRL QNINLAFHFE VEQQVNGWFI NFFGFNGTAG
401: VWRIKALEEC GGWLERTTVE DMDIAVRAHL CGWKFIYVND VKCLCELPES YETYKKQQHR WHSGPMQLFR LCFSDILRSK LFKGDASELS DEGKEDIEYR
501: M
101: DSRRYRVIKV FLTVSVILLV FELVAYFRGW HFSPLTVESA SAEVLDLAEY VYANWLDIRA NYLAPPLQSL ISMCIVLFLI QSVDRVVLVL GCFWIKFRGL
201: KPLAEIDYSS DVENLNAEYY PMVLLQIPMC NEREFIHFCR TSLLKAKCRA VCVQDWPKDR MLVQILDDSD DLGVQGLIKA EVQKWQQRGV HIIYRHCLIR
301: TGYKAGNLKS AMSCDYVKNY EFVAIFDADF QPTPDFLKNT VPYFKGHDDV ALVQTRWAFV NKDENLVTRL QNINLAFHFE VEQQVNGWFI NFFGFNGTAG
401: VWRIKALEEC GGWLERTTVE DMDIAVRAHL CGWKFIYVND VKCLCELPES YETYKKQQHR WHSGPMQLFR LCFSDILRSK LFKGDASELS DEGKEDIEYR
501: M
001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS
Arabidopsis Description
CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.