Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08003 | Canola | cytosol, peroxisome, plasma membrane | 93.84 | 92.09 |
| CDX74051 | Canola | cytosol, peroxisome, plasma membrane | 93.69 | 91.42 |
| Bra001246.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 93.55 | 91.27 |
| PGSC0003DMT400053633 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 19.94 | 77.27 |
| Solyc09g057640.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 74.49 | 74.05 |
| GSMUA_Achr6P27800_001 | Banana | plasma membrane | 69.94 | 73.84 |
| KRH66156 | Soybean | endoplasmic reticulum | 74.93 | 72.28 |
| VIT_00s0580g00010.t01 | Wine grape | plasma membrane, plastid | 79.77 | 72.24 |
| KRH07420 | Soybean | plasma membrane | 73.75 | 72.06 |
| PGSC0003DMT400095504 | Potato | plasma membrane | 49.41 | 67.27 |
| AT4G31590.1 | Thale cress | plasma membrane | 62.32 | 61.42 |
| AT2G24630.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 61.0 | 60.29 |
| AT3G28180.1 | Thale cress | plasma membrane | 59.24 | 60.03 |
| AT4G07960.1 | Thale cress | plasma membrane | 61.29 | 59.8 |
| AT5G03760.1 | Thale cress | plasma membrane | 33.58 | 42.96 |
| AT1G23480.2 | Thale cress | plasma membrane | 33.72 | 41.37 |
| AT5G22740.1 | Thale cress | plasma membrane | 32.11 | 41.01 |
| AT3G56000.1 | Thale cress | endoplasmic reticulum | 31.82 | 40.56 |
| AT2G35650.1 | Thale cress | plasma membrane | 32.4 | 39.75 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 30.94 | 39.29 |
| AT5G16190.4 | Thale cress | plasma membrane | 30.79 | 39.11 |
| AT1G24070.1 | Thale cress | plasma membrane | 31.52 | 38.95 |
| AT4G16590.1 | Thale cress | endoplasmic reticulum, plasma membrane | 28.15 | 36.92 |
| Zm00001d010955_P001 | Maize | extracellular | 9.68 | 35.68 |
Protein Annotations
| MapMan:21.2.1.1.1 | Gene3D:3.90.550.10 | EntrezGene:819921 | ProteinID:AAF02144.1 | ProteinID:AEE74529.1 | ProteinID:ANM64747.1 |
| ArrayExpress:AT3G07330 | EnsemblPlantsGene:AT3G07330 | RefSeq:AT3G07330 | TAIR:AT3G07330 | RefSeq:AT3G07330-TAIR-G | EnsemblPlants:AT3G07330.1 |
| TAIR:AT3G07330.1 | Symbol:ATCSLC06 | EMBL:AY070454 | EMBL:AY142677 | Unigene:At.26732 | GO:GO:0000003 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0008150 | GO:GO:0009856 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0048868 | GO:GO:0071555 | InterPro:Glyco_trans_2-like | InterPro:IPR029044 | EMBL:KJ138836 | RefSeq:NP_001326755.1 |
| RefSeq:NP_187389.1 | InterPro:Nucleotide-diphossugar_trans | PFAM:PF13632 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR32044 | PANTHER:PTHR32044:SF14 | UniProt:Q9SRT3 | SUPFAM:SSF53448 | TMHMM:TMhelix |
| UniParc:UPI00000486C4 | UniProt:W8PVG2 | SEG:seg | : | : | : |
Description
CSLC6Probable xyloglucan glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRT3]
Coordinates
chr3:-:2335612..2339168
Molecular Weight (calculated)
78375.7 Da
IEP (calculated)
9.000
GRAVY (calculated)
0.101
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSQNEEFQ QWWNKQRDRN NHDVLYAGDD EAFLTVEIRT PATVDPDKDR IRTRTVRQLS RLYLLKFKQL ASSFLWIGNS FLYLVRTANR RIANDNPPSV
101: SSSARLYRLI KGFLVVVVLL LCFELAAYFK GWHFTPPSVA SAEVAVEVVY AWWLEIRASY LAPPLQSLTN VCIVLFLIQS VDRLVLVLGC FWIKLRRIKP
201: VASMEYPTKL VGEGVRLEDY PMVIVQIPMC NEKEVYQQSI GAVCMLDWPR ERMLVQVLDD SSELDVQQLI KAEVQKWQQR GVRIVYRHRL IRTGYKAGNL
301: KAAMNCEYVK DYEFVAIFDA DFQPPADFLK KTVPHFKGNE ELALVQTRWA FVNKDENLLT RLQNINLSFH FEVEQQVNGV FINFFGFNGT AGVWRIKALE
401: DCGGWLERTT VEDMDIAVRA HLCGWKFIYL NDVKCLCELP ESYEAYKKQQ YRWHSGPMQL FRLCFFDILR SKVSAAKKAN MIFLFFLLRK LILPFYSFTL
501: FCVILPLTMF FPEANLPSWV VCYIPGIMSI LNIIPAPRSF PFIVPYLLFE NTMSVTKFGA MISGLFKFDS SYEWVVTKKL GRSSEADLVA YAESGSLVES
601: TTIQRSSSDS GLTELSKLGA AKKAGKTKRN RLYRTEIALA FILLAASVRS LLSAQGIHFY FLLFQGITFV IVGLDLIGEQ VS
101: SSSARLYRLI KGFLVVVVLL LCFELAAYFK GWHFTPPSVA SAEVAVEVVY AWWLEIRASY LAPPLQSLTN VCIVLFLIQS VDRLVLVLGC FWIKLRRIKP
201: VASMEYPTKL VGEGVRLEDY PMVIVQIPMC NEKEVYQQSI GAVCMLDWPR ERMLVQVLDD SSELDVQQLI KAEVQKWQQR GVRIVYRHRL IRTGYKAGNL
301: KAAMNCEYVK DYEFVAIFDA DFQPPADFLK KTVPHFKGNE ELALVQTRWA FVNKDENLLT RLQNINLSFH FEVEQQVNGV FINFFGFNGT AGVWRIKALE
401: DCGGWLERTT VEDMDIAVRA HLCGWKFIYL NDVKCLCELP ESYEAYKKQQ YRWHSGPMQL FRLCFFDILR SKVSAAKKAN MIFLFFLLRK LILPFYSFTL
501: FCVILPLTMF FPEANLPSWV VCYIPGIMSI LNIIPAPRSF PFIVPYLLFE NTMSVTKFGA MISGLFKFDS SYEWVVTKKL GRSSEADLVA YAESGSLVES
601: TTIQRSSSDS GLTELSKLGA AKKAGKTKRN RLYRTEIALA FILLAASVRS LLSAQGIHFY FLLFQGITFV IVGLDLIGEQ VS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.