Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023993.1-P | Field mustard | plasma membrane | 92.05 | 95.79 |
| CDY13445 | Canola | plasma membrane | 94.65 | 95.34 |
| CDX72314 | Canola | plasma membrane | 93.79 | 94.88 |
| AT2G24630.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 88.01 | 88.26 |
| CDX68766 | Canola | plasma membrane | 96.68 | 86.32 |
| VIT_04s0069g00780.t01 | Wine grape | plasma membrane | 82.23 | 81.99 |
| KRH61950 | Soybean | plasma membrane | 80.64 | 80.52 |
| KRH52609 | Soybean | plasma membrane | 80.2 | 80.09 |
| VIT_09s0018g01950.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 79.91 | 79.8 |
| PGSC0003DMT400024646 | Potato | golgi, peroxisome, plasma membrane | 78.18 | 77.95 |
| Solyc08g006310.2.1 | Tomato | golgi, peroxisome, plasma membrane | 77.89 | 77.67 |
| KRH16165 | Soybean | plasma membrane | 77.75 | 77.63 |
| CDY57881 | Canola | extracellular | 14.02 | 77.6 |
| Os08t0253800-01 | Rice | cytosol, peroxisome, plasma membrane | 53.47 | 77.24 |
| KRH04930 | Soybean | plasma membrane | 76.88 | 76.77 |
| CDY60854 | Canola | plasma membrane | 96.39 | 76.23 |
| AT3G28180.1 | Thale cress | plasma membrane | 67.05 | 68.94 |
| Bra011284.1-P | Field mustard | plasma membrane | 96.39 | 68.69 |
| AT4G07960.1 | Thale cress | plasma membrane | 67.05 | 66.38 |
| HORVU3Hr1G000340.2 | Barley | plasma membrane | 61.71 | 66.1 |
| KRH57821 | Soybean | plasma membrane | 22.69 | 65.15 |
| TraesCSU01G038900.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.51 | 64.13 |
| TraesCS3B01G000600.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.51 | 64.05 |
| Zm00001d049336_P001 | Maize | plasma membrane | 70.23 | 63.61 |
| Zm00001d024178_P002 | Maize | cytosol, peroxisome, plasma membrane | 69.51 | 63.54 |
| TraesCS3D01G010500.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.36 | 63.32 |
| KXG24822 | Sorghum | peroxisome | 69.22 | 63.03 |
| AT3G07330.1 | Thale cress | cytosol, peroxisome, plasma membrane | 61.42 | 62.32 |
| AT5G03760.1 | Thale cress | plasma membrane | 34.54 | 44.84 |
| AT5G22740.1 | Thale cress | plasma membrane | 32.23 | 41.76 |
| AT2G35650.1 | Thale cress | plasma membrane | 33.24 | 41.37 |
| AT4G13410.1 | Thale cress | extracellular, plasma membrane | 31.94 | 41.15 |
| AT5G16190.4 | Thale cress | plasma membrane | 31.79 | 40.97 |
| AT1G24070.1 | Thale cress | plasma membrane | 32.37 | 40.58 |
| AT1G23480.2 | Thale cress | plasma membrane | 32.08 | 39.93 |
| AT3G56000.1 | Thale cress | endoplasmic reticulum | 30.78 | 39.81 |
| AT4G16590.1 | Thale cress | endoplasmic reticulum, plasma membrane | 28.32 | 37.69 |
Protein Annotations
| MapMan:21.2.1.1.1 | Gene3D:3.90.550.10 | EntrezGene:829286 | UniProt:A0A178UYZ0 | ProteinID:AEE85933.1 | EMBL:AK221113 |
| ArrayExpress:AT4G31590 | EnsemblPlantsGene:AT4G31590 | RefSeq:AT4G31590 | TAIR:AT4G31590 | RefSeq:AT4G31590-TAIR-G | EnsemblPlants:AT4G31590.1 |
| TAIR:AT4G31590.1 | Symbol:ATCSLC05 | EMBL:BT003334 | EMBL:BT008423 | ProteinID:CAA19764.1 | ProteinID:CAB79877.1 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0071555 | InterPro:IPR029044 |
| EMBL:KJ138731 | RefSeq:NP_194887.1 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAO98344.1 | PFAM:PF13641 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR32044 | PANTHER:PTHR32044:SF7 | UniProt:Q9SB75 | SUPFAM:SSF53448 | TMHMM:TMhelix | UniParc:UPI000000BFBB |
| UniProt:W8PV45 | SEG:seg | : | : | : | : |
Description
CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
Coordinates
chr4:-:15309506..15312987
Molecular Weight (calculated)
79425.2 Da
IEP (calculated)
8.694
GRAVY (calculated)
0.097
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.