Factsheet for TraesCSU01G038900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	98.67	98.54
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	98.8	97.76
HORVU3Hr1G000340.2	Barley	plasma membrane	80.8	93.81
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	56.8	88.94
KXG24822	Sorghum	peroxisome	82.0	80.92
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	81.07	80.32
Zm00001d049336_P001	Maize	plasma membrane	81.2	79.71
CDX76802	Canola	plasma membrane	62.53	71.06
CDX72314	Canola	plasma membrane	64.53	70.76
Bra007838.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	62.27	70.76
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	65.33	70.71
KRH52609	Soybean	plasma membrane	64.93	70.27
VIT_04s0069g00780.t01	Wine grape	plasma membrane	64.67	69.88
KRH61950	Soybean	plasma membrane	64.53	69.84
CDY13445	Canola	plasma membrane	63.87	69.72
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	64.13	69.71
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	63.47	69.59
AT4G31590.1	Thale cress	plasma membrane	64.13	69.51
Bra023993.1-P	Field mustard	plasma membrane	61.6	69.47
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	63.47	68.59
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	63.47	68.59
KRH16165	Soybean	plasma membrane	61.2	66.23
KRH04930	Soybean	plasma membrane	60.8	65.8
CDX68766	Canola	plasma membrane	64.13	62.06
CDY57881	Canola	extracellular	10.27	61.6
CDY60854	Canola	plasma membrane	64.27	55.09
Bra011284.1-P	Field mustard	plasma membrane	64.0	49.43
KRH57821	Soybean	plasma membrane	14.53	45.23
TraesCSU01G046600.1	Wheat	plasma membrane	28.13	37.02

Protein Annotations

EnsemblPlants:TraesCSU01G038900.1	EnsemblPlantsGene:TraesCSU01G038900	Gene3D:3.90.550.10	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044
PANTHER:PTHR32044:SF7	PFAM:PF13641	SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	MapMan:21.2.1.1.1

Description

No Description!

Coordinates

chrUn:+:31929871..31933572

Molecular Weight (calculated)

85877.7 Da

IEP (calculated)

8.241

GRAVY (calculated)

-0.051

Length

750 amino acids

Sequence
(BLAST)

001: MASSWWGDKE EHGTPVVVKM DNPYSLVEID GPGMDSSEKA RRSKNAKQFK WVLLLRAHRA VGCVAWLAGG FWGLLGAVNR RVRRSRDADA EPDAEASGRG
101: RHMLGFLRAF LLLSLAMLAF ETAAYLKGWH YFPRDLPEHY LRQLPEHLQN LPEHLRHLPE NLRHLPDGLR MPEQQEIQGW LHRAYVAWLA FRIDYIAWAI
201: EKLSGFCIVL FMVQSIDRIL LCLGCFWIKV RGIKPGLVAT KKRGNKYADD NDLEDGDDLG AYFPMVLLQM PMCNEKEVYE TSISHVCQID WPRDRMLVQV
301: LDDSDDETCQ MLIRAEVTKW NQRGVNIIYR HRLSRTGYKA GNLKSAMSCE YVKDYEFVAI FDADFQPNPD FLKLTVPHFK GNPELGLVQA RWSFVNKDEN
401: LLTRLQNINL CFHFEVEQQV NGIYLNFFGF NGTAGVWRIE ALEDSGGWME RTTVEDMDIA VRAHLQGWKF IYLNDVKVLC ELPESYQAYR KQQHRWHSGP
501: MQLFRLCLPA IIKSKIPLWK KANLVMLFFL LRKLILPFYS FTLFCVILPL TMFVPEAELP IWVICYVPMI MSVLNILPAP KSFPFVIPYL LFENTMSVTK
601: FNAMVSGLFQ LGSSYEWVVT KKAGRTSSES DIFAMAEKTD TATRPAPRLV RGVSEAGLEA WAKTHQLDNK DLQLKAEAEE VTSLAAAIKK TSKAKPPNRI
701: FKKELALAFL LLIAATRSLL SAQGLHFYFL LFQGVTFLVV GLDLIGEQVS

Best Arabidopsis Sequence Match ( AT4G31590.1 )
(BLAST)

001: MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL
101: GRDRWLFTAI KLFLAVSLVI LGFEIVAYFR GWHYFQSPSL HIPTSTLEIQ SLFHLVYVGW LTLRADYIAP PIKALSKFCI VLFLIQSVDR LVLCLGCFWI
201: KYKKIKPRFD EEPFRNDDAE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRIL VQVLDDSNDE SIQQLIKAEV AKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEY VAIFDADFQP TPDFLKLTVP HFKDNPELGL VQARWTFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LGSILTSKIA IWKKANLILL FFLLRKLILP
501: FYSFTLFCII LPLTMFVPEA ELPVWVICYI PVFMSFLNLL PSPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLSITEK
601: ETPTKKSQLL RGVSDSELLE LSQLEEQKQA VSKKPVKKTN KIYHKELALA FLLLTAALRS LLAAQGVHFY FLLFQGVTFL LVGLDLIGEQ MS

Arabidopsis Description

CSLC5CSLC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UYZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.