Factsheet for Bra007838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76802	Canola	plasma membrane	97.42	97.42
CDY34762	Canola	endoplasmic reticulum, peroxisome, plasma membrane	99.24	95.76
AT2G24630.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	92.88	88.84
Bra023993.1-P	Field mustard	plasma membrane	84.55	83.91
Os08t0253800-01	Rice	cytosol, peroxisome, plasma membrane	55.91	77.04
VIT_04s0069g00780.t01	Wine grape	plasma membrane	79.7	75.79
KRH61950	Soybean	plasma membrane	77.58	73.88
VIT_09s0018g01950.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	77.58	73.88
KRH52609	Soybean	plasma membrane	77.12	73.45
PGSC0003DMT400024646	Potato	golgi, peroxisome, plasma membrane	76.82	73.05
Solyc08g006310.2.1	Tomato	golgi, peroxisome, plasma membrane	76.67	72.91
KRH16165	Soybean	plasma membrane	75.61	72.01
KRH04930	Soybean	plasma membrane	74.7	71.14
HORVU3Hr1G000340.2	Barley	plasma membrane	64.39	65.79
Bra039061.1-P	Field mustard	plasma membrane	67.27	65.68
Bra025323.1-P	Field mustard	plasma membrane	66.52	65.04
Bra000635.1-P	Field mustard	plasma membrane	66.82	63.73
TraesCS3B01G000600.1	Wheat	cytosol, peroxisome, plasma membrane	70.91	62.32
TraesCSU01G038900.1	Wheat	cytosol, peroxisome, plasma membrane	70.76	62.27
TraesCS3D01G010500.1	Wheat	cytosol, peroxisome, plasma membrane	70.76	61.61
Zm00001d024178_P002	Maize	cytosol, peroxisome, plasma membrane	70.3	61.29
KXG24822	Sorghum	peroxisome	70.45	61.18
Zm00001d049336_P001	Maize	plasma membrane	70.76	61.13
Bra011284.1-P	Field mustard	plasma membrane	86.97	59.11
Bra001246.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.97	58.51
Bra033039.1-P	Field mustard	plasma membrane	26.21	53.07
KRH57821	Soybean	plasma membrane	18.94	51.87
Bra005779.1-P	Field mustard	plasma membrane	35.91	44.55
Bra009512.1-P	Field mustard	plasma membrane	35.76	44.36
Bra008638.1-P	Field mustard	plasma membrane	32.12	41.98
Bra023020.1-P	Field mustard	plasma membrane	34.7	41.79
Bra006343.1-P	Field mustard	plasma membrane	31.82	41.67
Bra020212.1-P	Field mustard	plasma membrane	33.18	41.01
Bra006633.1-P	Field mustard	plasma membrane	31.52	40.78
Bra007207.1-P	Field mustard	plasma membrane	31.82	40.15
Bra024603.1-P	Field mustard	plasma membrane	33.48	39.82
Bra012702.1-P	Field mustard	plasma membrane	30.15	39.41
Bra012416.1-P	Field mustard	plasma membrane	32.42	39.19
Bra017305.1-P	Field mustard	plasma membrane	34.24	35.2
Bra032705.1-P	Field mustard	plasma membrane	33.03	30.62
Bra002426.1-P	Field mustard	plasma membrane	33.03	22.5

Protein Annotations

EnsemblPlants:Bra007838.1	EnsemblPlants:Bra007838.1-P	EnsemblPlantsGene:Bra007838	Gene3D:3.90.550.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR32044	PANTHER:PTHR32044:SF7	PFAM:PF13641
SEG:seg	SUPFAM:SSF53448	TMHMM:TMhelix	UniParc:UPI0002542D6B	UniProt:M4CUE3	MapMan:21.2.1.1.1

Description

AT2G24630 (E=0.0) ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08; cellulose synthase/ transferase, transferring glycosyl groups

Coordinates

chrA09:+:31189834..31192393

Molecular Weight (calculated)

75802.9 Da

IEP (calculated)

8.341

GRAVY (calculated)

0.109

Length

660 amino acids

Sequence
(BLAST)

001: MENPNYSIVE VDEPESAFRP MERTRGKNAK QVTWVLLLQA HKAVGCLAWL ATAFWSLLGS VKRRLCFTHR LGSERLGRDR WLFTAIKLFL AASLSVLVFE
101: LIAYYKGWHY FKNIPTSKLE IQSLFHLLYV GWLSLRADYI APPVKALSKL CIVLFLVQSV DRLILCLGCF WIKYKKIKPR IDEEPFGNDD VEGSGSEYPM
201: VLVQIPMCNE REVYEQSISA VCQLDWPKDR MLIQVLDDSD DGSIQELIRA EVTKWSQKGV NIIYRHRLVR TGYKAGNLKS AMSCDYVEAY EFVAIFDADF
301: QPNSDFLKLT VPHFKEKPEL GLVQARWAFV NKDENLLTRL QNINLCFHFE VEQQVNGVFL NFFGFNGTAG VWRIKALEES GGWLERTTVE DMDIAVRAHL
401: HGWKFIYLND VKVLCEVPES YEAYKKQQHR WHSGPMQLFR LCLGAILTSK IAMWKKANLI LLFFLLRKLI LPFYSFTLFC VILPITMFVP EAELPVWVIC
501: YVPIFMSLLN VLPAPKSFPF IVPYLLFENT MSVTKFNAMV SGLFQLGSSY EWIVTKKAGR SSESDLLGLT DKRMPPNQMQ RGASESELLE ISQAEEQKKQ
601: TVPVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Best Arabidopsis Sequence Match ( AT2G24630.2 )
(BLAST)

001: MAPRFDFSDL WAKETRRGTP VVVKMENPNY SIVEVEEPDS AFQPMEKSRG KNAKQVTWVL LLKAHKAVGC LTWVATVFWS LLGSVKRRLS FTHPLGSERL
101: GRDGWLFSAI KLFLVASLAI LAFELVAYYR GWHYFKNPNL HIPTSKLEIQ SLLHLFYVGW LSLRADYIAP PIKALSKFCI VLFLVQSVDR LILCLGCLWI
201: KFKKIKPRID EEHFRNDDFE GSGSEYPMVL VQIPMCNERE VYEQSISAVC QLDWPKDRLL VQVLDDSDDE SIQELIRDEV TKWSQKGVNI IYRHRLVRTG
301: YKAGNLKSAM SCDYVEAYEF VAIFDADFQP NSDFLKLTVP HFKEKPELGL VQARWAFVNK DENLLTRLQN INLCFHFEVE QQVNGVFLNF FGFNGTAGVW
401: RIKALEESGG WLERTTVEDM DIAVRAHLHG WKFIYLNDVK VLCEVPESYE AYKKQQHRWH SGPMQLFRLC LRSILTSKIA MWKKANLILL FFLLRKLILP
501: FYSFTLFCVI LPITMFVPEA ELPIWVICYV PIFMSLLNIL PAPKSFPFIV PYLLFENTMS VTKFNAMVSG LFQLGSSYEW IVTKKAGRSS ESDLLALTDK
601: ESEKMPNQIL RGVSDSELLE ISQVEEQKKQ PVSVKKTNKI FHKELALAFL LLTAAVRSLL ASQGVHFYFL LFQGLTFLLV GLDLIGEQMS

Arabidopsis Description

CSLC8Probable xyloglucan glycosyltransferase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJA2]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.